DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and AT4G26480

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_194378.2 Gene:AT4G26480 / 828754 AraportID:AT4G26480 Length:308 Species:Arabidopsis thaliana


Alignment Length:328 Identity:95/328 - (28%)
Similarity:133/328 - (40%) Gaps:107/328 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 GNAGGNKGFASFFN---------SQNSNDSTSNGAFDNSADSAAERKRKRKSRWGGSENDKT-FI 288
            |..||..|...|..         |...:.:.|.|.  .|..|....:.|..|......:..| |:
plant    14 GGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGL--RSQPSFLVEQEKYLSELLAERHKLTPFL 76

  Fly   289 PGMPTILPSTLDPAQQEAYLVQFQIEEI---SR-----KLRTGDLGITQN------------PEE 333
            |    :||.......||...|...:|..   ||     .|.:|  ||.||            |.|
plant    77 P----VLPHVCRLMNQEILRVTTLLENALSQSRFDHPSPLASG--GIFQNSRADMNGWASQFPSE 135

  Fly   334 R--SPSPEPIY-----SSDGKRLNTREFRYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRV 391
            |  |.||.|.:     ||.|                    |||| :|:                 
plant   136 RSVSSSPAPNWLNSPGSSSG--------------------LIVK-RTI----------------- 162

  Fly   392 SDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKE--------GKVGRKDG 448
              :|.||.:::|:.||||.|:|||||:||.:|..|..:::|||:||:|:        ||      
plant   163 --RVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGK------ 219

  Fly   449 QPLPGED---EPLHAFITAPNP-EAVRKAVDKIKDVIRQGI-EVPEGHNDLRRMQLRELAQLNGT 508
               ||.:   ||||..:.|..| |.|...:.:.::::...: .|.|.|:..::.||||||.|||:
plant   220 ---PGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGS 281

  Fly   509 LRE 511
            |||
plant   282 LRE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 89/300 (30%)
PTZ00368 <519..>568 CDD:173561
AT4G26480NP_194378.2 STAR_dimer 61..>93 CDD:435414 8/35 (23%)
KH-I 159..259 CDD:469614 38/128 (30%)
Blue background indicates that the domain is not in the aligned region.

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