DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and SF1

DIOPT Version :9

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001365886.1 Gene:SF1 / 7536 HGNCID:12950 Length:764 Species:Homo sapiens


Alignment Length:678 Identity:290/678 - (42%)
Similarity:355/678 - (52%) Gaps:203/678 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 GNAGGNKGFASFFNSQNSNDSTSNGAFDNSADSAAERKRKRKSRWG-GSENDKTFIPGMPTILPS 297
            |.|||...|.|                          |::::|||. .:...||.||||||::|.
Human   129 GPAGGGGDFPS--------------------------KKRKRSRWNQDTMEQKTVIPGMPTVIPP 167

  Fly   298 TLDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEE 362
            .|...|:.||:||.|||:::||||||||||..|||:|||||||||:|:||||||||||.||:|||
Human   168 GLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEE 232

  Fly   363 QRHQLIVKMQTVNPEFKPPADYKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTG 427
            :||.||.:|..:||:||||||||||.|||||||:|||:::|:||||||||||||||||.:||:..
Human   233 ERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECN 297

  Fly   428 AKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAFITAPNPEAVRKAVDKIKDVIRQGIEVPEGHN 492
            |||:||||||||||||||||||.||||||||||.:||...|.|:|||::|:::::||||.||..|
Human   298 AKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQN 362

  Fly   493 DLRRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIVCTSCGGTGHLTKDCRNK 557
            |||:|||||||:|||||||:|       :...:.||..:...||||.|||.|||.||:..||:.:
Human   363 DLRKMQLRELARLNGTLREDD-------NRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQ 420

  Fly   558 RPGSGVPGMACEDSQAKIDEEYMSLMAELGEGPPPPSASAKTDP-------------PASNGPQL 609
            |||.  |..|  ..:|::|:||:||||||||.|.|.|..:.:.|             ||:|.|  
Human   421 RPGD--PQSA--QDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPP-- 479

  Fly   610 HRASYSIFDKKPSQMQAIQSPP------SSSSRD----HQRDLGGWGAAAHEHGMGMEHGMGLDQ 664
                      .||.|...||.|      .|.||.    |....||.|...|    ...|.:....
Human   480 ----------PPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPH----SFPHPLPSLT 530

  Fly   665 HGHGLAAMDHG---------------MSLGMEHAMAAYVPAPPGTQAPPP--------------- 699
            .|||...|.|.               |:.|         |.|||...|||               
Human   531 GGHGGHPMQHNPNGPPPPWMQPPPPPMNQG---------PHPPGHHGPPPMDQYLGSTPVGSGVY 586

  Fly   700 --------MPPPLMPWMSAP------QPPPPATEPLNP----------------------PIP-- 726
                    ||||.|..|..|      |||||.:.||.|                      |:|  
Human   587 RLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ 651

  Fly   727 ------------GTLPP----------------------LIPPPPGTSAPPMPPWGGGAYSGWGG 757
                        |::||                      ::|.|||.. ||:||.          
Human   652 QNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQ-PPLPPG---------- 705

  Fly   758 GYAPPPPPPCAPPPPALSLSQPPPPPPP 785
              |||||||  |||.:..:...||||||
Human   706 --APPPPPP--PPPGSAGMMYAPPPPPP 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 168/259 (65%)
SF1-HH 274..385 CDD:292892 72/111 (65%)
SF1_like-KH 392..510 CDD:239088 86/117 (74%)
SF1NP_001365886.1 MSL5 142..382 CDD:227503 148/240 (62%)
ZnF_C2HC 403..418 CDD:197667 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160022
Domainoid 1 1.000 158 1.000 Domainoid score I4125
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 475 1.000 Inparanoid score I1499
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52021
OrthoDB 1 1.010 - - D367566at33208
OrthoFinder 1 1.000 - - FOG0003999
OrthoInspector 1 1.000 - - oto88359
orthoMCL 1 0.900 - - OOG6_102013
Panther 1 1.100 - - LDO PTHR11208
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R128
SonicParanoid 1 1.000 - - X2762
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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