DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and how

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_001238186.2 Gene:how / 4577936 VectorBaseID:AGAMI1_006092 Length:378 Species:Anopheles gambiae


Alignment Length:440 Identity:108/440 - (24%)
Similarity:185/440 - (42%) Gaps:130/440 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 STSNGAFDNSADSAAERKRKRKSRWGGSENDKTFIPGMPTILPSTLDPAQQEA-------YLVQF 311
            ||..|..:||..:..:::::::.:...::...|  ..:...|...|...:|.|       ::.:.
Mosquito    12 STYGGTVENSGTTNQQQQQQQQQQQQPNQQQST--QSIADYLAQLLKDRKQLAAFPNVFLHIERL 74

  Fly   312 QIEEISRKLRTGDL---GITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKMQT 373
            ..|||| |:|....   |:|:.|.: .|.||      |:.:                       |
Mosquito    75 LDEEIS-KVRASLFHINGVTKEPLQ-LPDPE------GESV-----------------------T 108

  Fly   374 VNPEFKPPADYKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSV 438
            :|                 :||.:|.:::||.||||.::||||.|.|.:|::||.||::|||||:
Mosquito   109 LN-----------------EKVYVPVKEYPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSM 156

  Fly   439 KEGKV-----GRKDGQPLPGEDEPLHAFITAPNPE-----AVRKAVDKIKDVIRQGIEVP--EGH 491
            ::.|.     |:.:.:.|   .:.||..||..:.|     .:::|:|::|.::     ||  ||.
Mosquito   157 RDKKKEDANRGKPNWEHL---SDDLHVLITVEDTENRATIKLKRALDEVKKLL-----VPHAEGE 213

  Fly   492 NDLRRMQLRELAQLNGTLRENDIQRCTCGS---------TDHKSWQ------CPDKPIITNTIVC 541
            ::|::.||.|||.:|||.|::..:.....:         ||.: |:      ..|:.::|.    
Mosquito   214 DELKKRQLMELAIINGTYRDSTTKVAPADNTFSFDPQQYTDDR-WKMAAAASAADQRMLTQ---- 273

  Fly   542 TSCGGTGHLTKDCRNKRPGSGVP----GMACEDSQAKIDEEYMSLMAELGEGPPPP--------S 594
            .|.....:|.  ..|:..|...|    .......:..:.....||:.  |.||||.        .
Mosquito   274 ASLAAAANLA--AANQMAGRTAPNPLGAPIILSPRISVPTTAASLIP--GSGPPPTIDHTTGLIY 334

  Fly   595 ASAKTD----PPASNGPQL-HRASYSIFDKKPSQMQAIQSPPSS-SSRDH 638
            ||..||    ..|:..|.| ..|.:|:        .||::|... :||||
Mosquito   335 ASPYTDYSYALAAAGNPLLTEYADHSV--------GAIKNPRRQYASRDH 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 75/279 (27%)
PTZ00368 <519..>568 CDD:173561 10/67 (15%)
howXP_001238186.2 None

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