DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and CG3927

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster


Alignment Length:207 Identity:49/207 - (23%)
Similarity:100/207 - (48%) Gaps:40/207 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 ITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKM--------QTVN-------- 375
            :|:...:..|:.:|       |||....::...|:.:|.:|..:.        ::|:        
  Fly     7 LTEKQNQDQPTYQP-------RLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRI 64

  Fly   376 PEFKPPAD-YKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVK 439
            |..:|.|| |:....::..||.:|..:.|..||.|.::||:||:|:.::::|..||:|:|:.|::
  Fly    65 PGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMR 129

  Fly   440 EGKVGRKDGQPLPGEDEPLHAFI----------TAPNPEAVRKAVDKIKDVIRQGIEVPEGHNDL 494
            :    |...:.|....:|.:|.:          .||..|...:....:.: ||:.: :|:.::|:
  Fly   130 D----RNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAE-IRKYL-IPDDNDDV 188

  Fly   495 RRMQLRELAQLN 506
            ...|.|||.::|
  Fly   189 WHEQQRELMEMN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 49/207 (24%)
PTZ00368 <519..>568 CDD:173561
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 26/105 (25%)
Blue background indicates that the domain is not in the aligned region.

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