DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and qkr58E-2

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster


Alignment Length:496 Identity:106/496 - (21%)
Similarity:172/496 - (34%) Gaps:150/496 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 GNAGGNKGFASFFNSQNSNDSTSNGAFDNSADSAAERKRKRKSRWGGSENDKTFIPGMPTILPST 298
            |:|.|..|..:.......:..||||..:|..::.|:.::                          
  Fly    28 GSAAGTAGAGTGVVPTGVSGGTSNGEHENEHNANADGEK-------------------------- 66

  Fly   299 LDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEE- 362
                .|.|..||..::|:          :|:.....:..|..:                |.::| 
  Fly    67 ----AQPAPAVQKYMQEL----------MTERSRMENHFPLAV----------------KLIDEA 101

  Fly   363 -QRHQLIVKMQTVNPEFKPPAD-YKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKD 425
             :|.||..::.|.:..    || |:....::|.||.:|.:. ...|:||.|:||:||:|:.::::
  Fly   102 LERVQLNGRIPTRDQY----ADVYQQRTIKLSQKVHVPIKD-KKFNYVGKLLGPKGNSLRRLQEE 161

  Fly   426 TGAKIIIRGKGSVKEGKVGRKDGQPLPGEDE--------PLHAFIT--APNPEAVRKAVDKIKDV 480
            |..||:|.|:.|:|:    |...:.|....:        |||..::  ||..||..:....:.::
  Fly   162 TQCKIVILGRFSMKD----RAREEELRNSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEI 222

  Fly   481 IRQGIEVPEGHNDLRRMQLREL-----AQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIV 540
            .|  ...|:.|:|:|:.|.|||     |....|||:...|                    :|...
  Fly   223 RR--YLTPDKHDDIRQEQYRELMEDPEAAKKLTLRQLQQQ--------------------SNAAA 265

  Fly   541 CTSCGGTG-------------HLTKDCRNKRPGSGVPGMACEDSQAKIDEE--YMSLMAELGEGP 590
            ..:.||.|             .......|:|.|........:.|..:.:||  |..........|
  Fly   266 SGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQP 330

  Fly   591 PPPSASAKTDPPASNGPQLHRASYSIFDKKPSQMQAIQSPP----SSSSRDHQRDLGGWGAAAHE 651
            .|      ..|.|..|..:|..       .|.|.....|||    |::|      ..|..|    
  Fly   331 KP------YVPAAQRGNAMHTT-------LPPQAIVRASPPGMVVSAAS------FNGRNA---- 372

  Fly   652 HGMGMEHGMGLDQHGHGLAAMDHGMSLGMEHAMAAYVPAPP 692
             |:|...|.|:  ..:.:.|...|...|.......|.||.|
  Fly   373 -GLGNAGGGGI--MANSIVATTGGGIGGAVPPNMRYRPAAP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 64/276 (23%)
PTZ00368 <519..>568 CDD:173561 7/61 (11%)
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 29/104 (28%)

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