DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and qkr58E-2

DIOPT Version :9

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster


Alignment Length:496 Identity:106/496 - (21%)
Similarity:172/496 - (34%) Gaps:150/496 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 GNAGGNKGFASFFNSQNSNDSTSNGAFDNSADSAAERKRKRKSRWGGSENDKTFIPGMPTILPST 298
            |:|.|..|..:.......:..||||..:|..::.|:.::                          
  Fly    28 GSAAGTAGAGTGVVPTGVSGGTSNGEHENEHNANADGEK-------------------------- 66

  Fly   299 LDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEE- 362
                .|.|..||..::|:          :|:.....:..|..:                |.::| 
  Fly    67 ----AQPAPAVQKYMQEL----------MTERSRMENHFPLAV----------------KLIDEA 101

  Fly   363 -QRHQLIVKMQTVNPEFKPPAD-YKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKD 425
             :|.||..::.|.:..    || |:....::|.||.:|.:. ...|:||.|:||:||:|:.::::
  Fly   102 LERVQLNGRIPTRDQY----ADVYQQRTIKLSQKVHVPIKD-KKFNYVGKLLGPKGNSLRRLQEE 161

  Fly   426 TGAKIIIRGKGSVKEGKVGRKDGQPLPGEDE--------PLHAFIT--APNPEAVRKAVDKIKDV 480
            |..||:|.|:.|:|:    |...:.|....:        |||..::  ||..||..:....:.::
  Fly   162 TQCKIVILGRFSMKD----RAREEELRNSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEI 222

  Fly   481 IRQGIEVPEGHNDLRRMQLREL-----AQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIV 540
            .|  ...|:.|:|:|:.|.|||     |....|||:...|                    :|...
  Fly   223 RR--YLTPDKHDDIRQEQYRELMEDPEAAKKLTLRQLQQQ--------------------SNAAA 265

  Fly   541 CTSCGGTG-------------HLTKDCRNKRPGSGVPGMACEDSQAKIDEE--YMSLMAELGEGP 590
            ..:.||.|             .......|:|.|........:.|..:.:||  |..........|
  Fly   266 SGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQP 330

  Fly   591 PPPSASAKTDPPASNGPQLHRASYSIFDKKPSQMQAIQSPP----SSSSRDHQRDLGGWGAAAHE 651
            .|      ..|.|..|..:|..       .|.|.....|||    |::|      ..|..|    
  Fly   331 KP------YVPAAQRGNAMHTT-------LPPQAIVRASPPGMVVSAAS------FNGRNA---- 372

  Fly   652 HGMGMEHGMGLDQHGHGLAAMDHGMSLGMEHAMAAYVPAPP 692
             |:|...|.|:  ..:.:.|...|...|.......|.||.|
  Fly   373 -GLGNAGGGGI--MANSIVATTGGGIGGAVPPNMRYRPAAP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 64/276 (23%)
SF1-HH 274..385 CDD:292892 15/113 (13%)
SF1_like-KH 392..510 CDD:239088 40/132 (30%)
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 38/121 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460734
Domainoid 1 1.000 45 1.000 Domainoid score I3083
eggNOG 1 0.900 - - E1_COG5176
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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