DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and qkr58E-3

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_477306.3 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster


Alignment Length:366 Identity:75/366 - (20%)
Similarity:138/366 - (37%) Gaps:123/366 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 QNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKM------------------QTVN 375
            :.|.|.:....|.:... .|||....::...|:|:|.:|....                  :...
  Fly     2 ETPSEFTEKQPPTHDHQ-PRLNEVAQKFLADLDEERQRLSADFPLCALLIDEAVDRVYCTGRIPG 65

  Fly   376 PEFKPPAD-YKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVK 439
            .||.  || ||....:::.||.:|.:|:|..||.|.::||:||:|:.::::|..||.|:|:.|::
  Fly    66 KEFY--ADVYKQKPMKITQKVFVPVKQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIR 128

  Fly   440 EGKVGRKDGQPLPGEDEPLHAFI---------TAPNP----EAVRKAVDKIKDVIRQGIEVPEGH 491
            :    |...:.|....:|.:|.:         |...|    ..:..|:.:|:..:     :|:.:
  Fly   129 D----RNKEEQLRSTGDPRYAHLQKDLFLEVSTVATPAECYARIAYALAEIRKYL-----IPDKN 184

  Fly   492 NDLRRMQLRELAQLNGTLREN------DIQRCTCGSTDHKSWQCPDKPIITNTIVCTSCGGTGHL 550
            :::...|||||.:::....:|      :..|...           ||..          ||.   
  Fly   185 DEVSHEQLRELMEMDPESAKNIHGPNLEAYRSVF-----------DKKF----------GGN--- 225

  Fly   551 TKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELGEGPP--------------------PPSA 595
                     .:|.|             :|::|:....|.||                    ||:.
  Fly   226 ---------SNGAP-------------KYINLIKRAAENPPEVDDVEEVAYEYEHRMPPKRPPTG 268

  Fly   596 SAKTDPPASNGPQLHRASYSIFDKK--PSQMQAIQSPPSSS 634
            ...:.|..|..| .:.|:|    |:  |:.|:.::.||..|
  Fly   269 YEYSKPRPSIIP-TNAAAY----KRPYPTDMKRMREPPIKS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 49/214 (23%)
PTZ00368 <519..>568 CDD:173561 6/48 (13%)
qkr58E-3NP_477306.3 KH-I_KHDRBS 76..177 CDD:411812 27/104 (26%)

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