DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and Sf1

DIOPT Version :9

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001104261.1 Gene:Sf1 / 22668 MGIID:1095403 Length:639 Species:Mus musculus


Alignment Length:641 Identity:284/641 - (44%)
Similarity:349/641 - (54%) Gaps:177/641 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 KRKRKSRWG-GSENDKTFIPGMPTILPSTLDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEER 334
            |::::|||. .:...||.||||||::|..|...|:.||:||.|||:::||||||||||..|||:|
Mouse    15 KKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDR 79

  Fly   335 SPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRVSDKVLIPQ 399
            ||||||||:|:||||||||||.||:|||:||.||.:|..:||:||||||||||.|||||||:|||
Mouse    80 SPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQ 144

  Fly   400 EQHPDINFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAFITA 464
            :::|:||||||||||||||||.:||:..|||:||||||||||||||||||.||||||||||.:||
Mouse   145 DEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTA 209

  Fly   465 PNPEAVRKAVDKIKDVIRQGIEVPEGHNDLRRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQC 529
            ...|.|:|||::|:::::||||.||..||||:|||||||:|||||||:|       :...:.||.
Mouse   210 NTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDD-------NRILRPWQS 267

  Fly   530 PDKPIITNTIVCTSCGGTGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELGEGPPPPS 594
            .:...||||.|||.|||.||:..||:.:|||.  |..|  ..:|::|:||:||||||||.|.|.|
Mouse   268 SETRSITNTTVCTKCGGAGHIASDCKFQRPGD--PQSA--QDKARMDKEYLSLMAELGEAPVPAS 328

  Fly   595 ASAKTDP-------------PASNGPQLHRASYSIFDKKPSQMQAIQSPP------SSSSRD--- 637
            ..:.:.|             ||||.|            .||.|...||.|      .|.:|.   
Mouse   329 VGSTSGPATTPLASAPRPAAPASNPP------------PPSLMSTTQSRPPWMNSGPSENRPYHG 381

  Fly   638 -HQRDLGGWGAAAHEHGMGMEHGMGLDQHGHGLAAMDHG---------------MSLGMEHAMAA 686
             |....||.|...|    ...|.:.....|||...|.|.               |:.|       
Mouse   382 MHGGGPGGPGGGPH----SFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQG------- 435

  Fly   687 YVPAPPGTQAPPP-----------------------MPPPLMPWMSAP------QPPPPATEPLN 722
              |.|||...|||                       ||||.|..|..|      |||||.:.||.
Mouse   436 --PHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLP 498

  Fly   723 P----------------------PIP--------------GTLPP-------------------- 731
            |                      |:|              |::||                    
Mouse   499 PWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGTPQMQGN 563

  Fly   732 --LIPPPPGTSAPPMPPWGGGAYSGWGGGYAPPPPPPCAPPPPALSLSQPPPPPPP 785
              ::|.|||.. ||:||.            |||||||  |||.:..:...||||||
Mouse   564 PTMVPLPPGVQ-PPLPPG------------APPPPPP--PPPGSAGMMYAPPPPPP 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 168/241 (70%)
SF1-HH 274..385 CDD:292892 72/111 (65%)
SF1_like-KH 392..510 CDD:239088 86/117 (74%)
Sf1NP_001104261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44 13/28 (46%)
Nuclear localization signal. /evidence=ECO:0000255 15..19 1/3 (33%)
MSL5 17..257 CDD:227503 167/239 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..94 23/28 (82%)
ZnF_C2HC 278..293 CDD:197667 9/14 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..584 66/296 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850391
Domainoid 1 1.000 158 1.000 Domainoid score I4143
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 473 1.000 Inparanoid score I1489
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52021
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003999
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102013
Panther 1 1.100 - - LDO PTHR11208
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R128
SonicParanoid 1 1.000 - - X2762
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.790

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