DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and KHDRBS2

DIOPT Version :9

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_016865823.1 Gene:KHDRBS2 / 202559 HGNCID:18114 Length:413 Species:Homo sapiens


Alignment Length:486 Identity:107/486 - (22%)
Similarity:163/486 - (33%) Gaps:204/486 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 QQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYSSDGKRLNTREFRYRKRLEEQRHQL 367
            ::|.||.:...|:.|.     |..........:...|....||||          |..||:::..
Human     2 EEEKYLPELMAEKDSL-----DPSFVHASRLLAEEIEKFQGSDGK----------KEDEEKKYLD 51

  Fly   368 IVKMQTVNPEFKPPADYKPPVTRVSDKVLIPQEQHPDINFVGLLIGPRGNTLKAMEKDTGAKIII 432
            ::..:.:               ::|::||||.:|:|..||||.|:|||||:||.::::||||:.|
Human    52 VISNKNI---------------KLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSI 101

  Fly   433 RGKGSV----KEGKVGRKDGQPLPGE-DEPLHAFIT--APNPEAVRK---AVDKIKDVIRQGIEV 487
            .||||:    ||.:: ||.|:..... .:.||..|.  ||..||..:   |:::||..:     |
Human   102 LGKGSMRDKAKEEEL-RKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFL-----V 160

  Fly   488 PEGHNDLRRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQCPDKPIITNTIVCTSCGGTGHLTK 552
            |:.::::|:.|||||:.|||:   .|..|                                    
Human   161 PDYNDEIRQEQLRELSYLNGS---EDSGR------------------------------------ 186

  Fly   553 DCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELGEG---PPPPSASAKTDPPASNGPQLHRASY 614
                   |.|:.|.....:..         ....|.|   ||||       ||.           
Human   187 -------GRGIRGRGIRIAPT---------APSRGRGGAIPPPP-------PPG----------- 217

  Fly   615 SIFDKKPSQMQAIQSPPSSSSRDHQRDLGGWGAAAHEHGMGMEHGMGLDQHGHGLAAMDHGMSLG 679
                      :.:.:|..|:                                             
Human   218 ----------RGVLTPRGST--------------------------------------------- 227

  Fly   680 MEHAMAAYVPAPP---GTQAPPPMPPPLMPWMSAPQPPPPATEPLN--PPIPGTL---------- 729
               .....:|.||   |...|.....|.:|...|  |||||.|...  |.:|.:|          
Human   228 ---VTRGALPVPPVARGVPTPRARGAPTVPGYRA--PPPPAHEAYEEYPSLPLSLFFDTVAKSHQ 287

  Fly   730 --PPLIPPPPGTSAPPMPPWGGGAYSGWGGG 758
              ...:|....|...|     |.::..|.||
Human   288 HCDNEVPQTGSTRLNP-----GRSFFYWHGG 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 68/218 (31%)
SF1-HH 274..385 CDD:292892 14/81 (17%)
SF1_like-KH 392..510 CDD:239088 54/127 (43%)
KHDRBS2XP_016865823.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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