Sequence 1: | NP_524654.2 | Gene: | SF1 / 43912 | FlyBaseID: | FBgn0025571 | Length: | 787 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035447.3 | Gene: | Khdrbs1 / 20218 | MGIID: | 893579 | Length: | 443 | Species: | Mus musculus |
Alignment Length: | 447 | Identity: | 107/447 - (23%) |
---|---|---|---|
Similarity: | 170/447 - (38%) | Gaps: | 120/447 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 284 DKTFIPGMPT-ILPSTLDPA----QQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPIYS 343
Fly 344 SDGKRLNTREFRYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRVSDKVLIPQEQHPDINFV 408
Fly 409 GLLIGPRGNTLKAMEKDTGAKIIIRGKGSV----KEGKVGRKDGQPLPGE-DEPLHAFITAPNP- 467
Fly 468 -EA---VRKAVDKIKDVIRQGIEVPEGHNDLRRMQLRELAQLNGTLRENDIQRCTCGSTDHKSWQ 528
Fly 529 CPDKPIITNTIVCTSCG----GT---GHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAEL 586
Fly 587 GEGPPPPSASAKTDPPASNGPQLHRASYSIFDKKPSQMQAIQSPPSSSSRDHQRDLGGWGAAAHE 651
Fly 652 HGMGMEHGMGLDQ-------HGHGLAAMDHGMSLGMEHAMAAYVPAPPGTQAPPPMP 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SF1 | NP_524654.2 | MSL5 | 253..512 | CDD:227503 | 68/242 (28%) |
SF1-HH | 274..385 | CDD:292892 | 19/105 (18%) | ||
SF1_like-KH | 392..510 | CDD:239088 | 49/127 (39%) | ||
Khdrbs1 | NP_035447.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..94 | 6/18 (33%) | |
Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q07666 | 100..260 | 54/196 (28%) | |||
Qua1 | 103..153 | CDD:318503 | 12/59 (20%) | ||
SF1_like-KH | 157..276 | CDD:239088 | 47/124 (38%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 280..317 | 6/36 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 326..345 | 7/47 (15%) | |||
Interaction with HNRNPA1. /evidence=ECO:0000250|UniProtKB:Q07666 | 351..443 | 20/86 (23%) | |||
Sam68-YY | 366..415 | CDD:318716 | 11/50 (22%) | ||
Interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q07666 | 400..420 | 5/24 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 411..443 | 6/24 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5176 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |