DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and vamp-7

DIOPT Version :9

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_500232.3 Gene:vamp-7 / 177041 WormBaseID:WBGene00022077 Length:261 Species:Caenorhabditis elegans


Alignment Length:57 Identity:15/57 - (26%)
Similarity:24/57 - (42%) Gaps:9/57 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 VRKAVDKIKDVIRQGIE-VPEGHNDLRRMQLRELA------QLNGTLRENDIQRCTC 519
            :|:.||.::.|:...:| :.|....|..|:.|..|      ....|.|.  :||..|
 Worm   175 IRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTSATSFKSTARR--VQRHFC 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 12/48 (25%)
SF1-HH 274..385 CDD:292892
SF1_like-KH 392..510 CDD:239088 11/46 (24%)
vamp-7NP_500232.3 Synaptobrevin 168..256 CDD:366387 15/57 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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