DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF1 and gld-1

DIOPT Version :10

Sequence 1:NP_524654.2 Gene:SF1 / 43912 FlyBaseID:FBgn0025571 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_492143.1 Gene:gld-1 / 172532 WormBaseID:WBGene00001595 Length:463 Species:Caenorhabditis elegans


Alignment Length:434 Identity:108/434 - (24%)
Similarity:181/434 - (41%) Gaps:114/434 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 QRDQHSQRSSRERTHVNP--FDTSNS---RNSLNQDHDQSRIPSLFDRQQGLETIREEGREQRFD 224
            |.:..|..|....:.:.|  .|..||   |..:..:....|.||  .|:.|..::|.. ...|..
 Worm    14 QLESQSSESPSRSSVMTPTSLDGDNSPRKRFPIIDNVPADRWPS--TRRDGWSSVRAP-PPARLT 75

  Fly   225 LTQTIQELMGNAGGNKGFASFFNSQNSNDSTSNGAFDNSADSAAERKRKRKSR------------ 277
            |:...:.:|..       .|...||..|...|...|:            .|||            
 Worm    76 LSTNNRHIMSP-------ISSAYSQTPNSLLSPAMFN------------PKSRSIFSPTLPATPM 121

  Fly   278 -WGGSENDKTFIPGMPTILPSTLDPAQQEAYLVQFQIEEISRKLRTGDLGITQNPEERSPSPEPI 341
             :|.|..||:...      |:..:|.:.|| .|::..:.:..|..     :|..|.        :
 Worm   122 SYGKSSMDKSLFS------PTATEPIEVEA-TVEYLADLVKEKKH-----LTLFPH--------M 166

  Fly   342 YSSDGKRLNTREFRYRKRLEEQRHQLIVKMQTVNP--EFKPPADYKPPVTRVSDKVLIPQEQHPD 404
            :|:..:.|:....|.|          :...||..|  |...||.   .:..:::|:.:|:.::||
 Worm   167 FSNVERLLDDEIGRVR----------VALFQTEFPRVELPEPAG---DMISITEKIYVPKNEYPD 218

  Fly   405 INFVGLLIGPRGNTLKAMEKDTGAKIIIRGKGSVKE-----GKVGRKDGQPLPGEDEPLHAFITA 464
            .||||.::||||.|.|.:|:|||.||::|||||:::     ...|:.:.:.|  ||: ||..:..
 Worm   219 YNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHL--EDD-LHVLVQC 280

  Fly   465 PNPE-----AVRKAVDKIKDVIRQGIEVPEGHNDLRRMQLRELAQLNGTLR----ENDIQRCTCG 520
            .:.|     .::.|::::|.::   |..|||.::|:|.||.|||.:|||.|    .|..:..|. 
 Worm   281 EDTENRVHIKLQAALEQVKKLL---IPAPEGTDELKRKQLMELAIINGTYRPMKSPNPARVMTA- 341

  Fly   521 STDHKSWQCPDKPIITNTIVCTSCGGTGHLTKDCRNKRPGSGVP 564
                       .|:::.|.:.:|    |.:   ..:..||||:|
 Worm   342 -----------VPLLSPTPLRSS----GPV---LMSPTPGSGLP 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF1NP_524654.2 MSL5 253..512 CDD:227503 76/287 (26%)
PTZ00368 <519..>568 CDD:173561 9/46 (20%)
gld-1NP_492143.1 STAR_dimer 146..190 CDD:435414 10/66 (15%)
KH-I_Hqk_like 204..304 CDD:411811 34/105 (32%)

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