Sequence 1: | NP_730591.2 | Gene: | skd / 43906 | FlyBaseID: | FBgn0003415 | Length: | 2768 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005112.2 | Gene: | MED13 / 9969 | HGNCID: | 22474 | Length: | 2174 | Species: | Homo sapiens |
Alignment Length: | 2939 | Identity: | 787/2939 - (26%) |
---|---|---|---|
Similarity: | 1186/2939 - (40%) | Gaps: | 965/2939 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 NGASLEDCHTNFYALTDLCGIKWRKFVNGERPNASSDPL------ADPILRSYSRCIQADMLCVW 67
Fly 68 RRVQSTKTDHADPNALTFEMTTSTKVHPPLSLAAAKELWIFWYGEEPDLSELVDAELLRVAANQA 132
Fly 133 LWNGTWKGALTYECRSLLFKALHNLMERFVLTKDIVRFGKWFVQPCTSSDRLFGRSSQHLSFSFT 197
Fly 198 FFVHGDT-VCASIDLREHPAVRPLTKEHLTEAAAAFAAASSPPGSNGSAASAGGAVPNPGQDPNG 261
Fly 262 ASMDGLDGGEGAAKAAPPPHARKVMLAPFGIAGILTGNSYKASDPIAEKILEDWASFFPL--CNK 324
Fly 325 D-----------NTDVPPVVEVVSGGHKMYHPTNYVLVTDLDDMEHMEFVEMQKMQSSVAGAAAE 378
Fly 379 SAVLASLSCPPGAASAPSSMGA---APSATAVPLGPASLNAPALAGAGVGATASSAAKEISRKAA 440
Fly 441 PQAVSALERLAFQPYYDQRPTSGFTFNTNNTH---IPASAAVEMPERTWQDCVMNTLH------- 495
Fly 496 ----VDAAAAAAAVASSTPASGTGSLSADGDENEQNKPPQDSKQLVQQQIQQQQQRQKLWNFVDP 556
Fly 557 MQKAPCICTNAQCNSSSSISNISNNKRPQQPLGSPALRAAVTGGSGNKSSSSSSSSSSSSSSSSS 621
Fly 622 YQQQ----H--YHQQHLQQQQQQRPGTPVLPATAATSSHHSSSLSNTSASNSSAATPRRHNVPFH 680
Fly 681 KRLLHSLASTASSTASTFRAKNHSNTTTDTNIPKQRHLGNTP--HGTPHGGASTYSRNSLGGDSS 743
Fly 744 MPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPA 808
Fly 809 PTPTDQHDSKSITASPYVHQTPSVEPPSYTDHAAGGGPAGGQGLGTGPGSVPAQQPATPTAATSA 873
Fly 874 GGAGSGGPSNAIGANAVGTISVKKLEMQ---QQTPSAAMAIKQEP-GAQGRGVGGVTSTTEALNN 934
Fly 935 FKRLYNPPKLTLKDPDSFYDEEWLKEVIYDFQYQEYWDYSTVKRPKMEKQRRPRYAKNLYEGQNH 999
Fly 1000 VKPVMPSPGSVYGSQLLSLDESASQAGGRGGGGQAAGSSGGGLVGIANSTASGSDVEADGSSFFQ 1064
Fly 1065 GLNIKTEPGLHSPSCKE-----TSKSSGGNSSGGGSGSGGNLFTAEGLNPSLNDLEQLFETSSND 1124
Fly 1125 ECSSVQIHTPPDSNNPSNGGCSAVTNTIEDLKRSTAVASAAVAAAAAAAASGAGN------IQAE 1183
Fly 1184 DLTKMFPTPPSHEQQHPNSSPCQTDVVMTDLSVDTTTTIITSSITTTCNTTITSSINTTTTACSN 1248
Fly 1249 PSNSIMLAAAQAPVTVVAIQTVSKMVKQEYNLELG----SPMEEPINDWDYVYRPPQQEKFVGST 1309
Fly 1310 RYAPLTNLPSQTQPPLTLPTGCFYQPTWSSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQK 1374
Fly 1375 LQQLQLQNQQQQQAAAAAAAAASGGVGHQKHQHQHLHDLLSAAPRTPLTPSTVPQPLSSG-GSQY 1438
Fly 1439 LLNQLNCPQAPPGASMQQLMHRAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVASP 1503
Fly 1504 ATSTSSYLNRPLHSQEHPHMHGLGGGATGVVGHGTGGGGHMGMVAYTGD-----AGIVSGGTAMA 1563
Fly 1564 AGSSSLLQELPEVNSVLVNILLYDTALNVFRDHNFDSSSVCVCNADTQKIGNIRGADSGVYVPLP 1628
Fly 1629 GVSFNPFPSGAGGALAGQRMLNGPSSAGFGGMRMISAFGGSPASASMPGAGSGHGHGPNGGSNSS 1693
Fly 1694 SCTPPSSNPHITGYVDDDPVECTCGFSAVVNRRLSHRAGLFYEDEVEITGIADDPGRNKQPTLLS 1758
Fly 1759 IIQSLSRKNQNKQGPGETSSALDKIGAGGLPNGQLEQLGHAVFDLLLDQCSIIQTSSSSVHRALQ 1823
Fly 1824 SHRRRMSRQRRIFGNNGA------PTASLASIANVLEFMDAHDVISLALEQSRLAFENQRMDNMM 1882
Fly 1883 DFHGNGSSSSHQQQQLTAFHAPPPALRHKLAGIGAGRLTVHKWPYLPVGFTRSNKEIVRTMNAIQ 1947
Fly 1948 PMLQNAFHCKSRGGSGSKDASSYNTVSGPLTWRQFHRLAGRAS----GQCEPQPIPSVVVGYEKD 2008
Fly 2009 WISVAPHSIHYWDKFLLEPYSYARDVVYVVVCPDNEHVVNCTRSYFRELSSTYEMCKLGKHTPIR 2073
Fly 2074 G--WDGFLQVGAARNNVPADRETTPLDDWLRTLEHAA-----LAEQIRRYAVAFIHQLAPYLSRV 2131
Fly 2132 PNDKTLLNPPD----------------GSGNSHSKG----------------------------- 2151
Fly 2152 ---GSSCSSNSSSV-SGLPGGDLP------TDNIKLEPGTEPQVQPMETNEI-------KQEPGV 2199
Fly 2200 GKGGTAAGETKP------TLILGDPLGM---GETLEDINPSAIVLYVVNPFTF--ASDSCELERL 2253
Fly 2254 ALIALLRCYAELLKAVPDSVRSQMNIQIISLESVMELGPCGNRKRFSDEIRCLALNIFSQCRRHL 2318
Fly 2319 VHAQSVKSLTGFGTAANMEAFLKTKDEPNRRAYKMYTAPFVLAPMHERNDKTDFSRSAGSMHGQN 2383
Fly 2384 EHRYSVMYCNYCLSEDQAWLLATATDERGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIM 2448
Fly 2449 GIISQTSQMWRLVIGRIGRIGHSELKSWSFLLSKQQLQKASKQFKDMCKQCTLMY--PPTILSAC 2511
Fly 2512 LVTLEPDAKLRVMPDQFTPDERFSQ---ISMQ-NPLATPQDVTCTHILVFPTSAVCAPFTRQFQN 2572
Fly 2573 EPQVDDDFLTFEEEGNEDFSDA-------DIGDLFWDTHMDRV-----SNHGSPGRMDDNRSWQS 2625
Fly 2626 AGGNNFK--------CTPPQEVEEVGSLNQQPISVGYMVSTAPTGRMPAWFWSACPHLEDVCPVF 2682
Fly 2683 LKTALHLHVPSIQSADDILNSTNAHQSGNDHPLDSNLTADVLRFVLEGYNALSWLALDSNTHDRL 2747
Fly 2748 SCLPINVQTLMDLY 2761 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
skd | NP_730591.2 | Med13_N | 15..490 | CDD:288451 | 148/500 (30%) |
Med13_C | 2234..2755 | CDD:283892 | 232/548 (42%) | ||
MED13 | NP_005112.2 | Med13_N | 14..384 | CDD:288451 | 148/500 (30%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 435..477 | 11/50 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 709..735 | 5/25 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 749..769 | 6/19 (32%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 787..816 | 11/58 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 959..1054 | 30/145 (21%) | |||
LXXLL motif 1 | 1188..1192 | 0/3 (0%) | |||
LXXLL motif 2 | 1279..1283 | 1/3 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1484..1505 | 2/20 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1557..1617 | 7/60 (12%) | |||
Med13_C | 1640..2161 | CDD:283892 | 232/548 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2015..2048 | 8/34 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165148774 | |
Domainoid | 1 | 1.000 | 331 | 1.000 | Domainoid score | I1145 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3600 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H21067 | |
Inparanoid | 1 | 1.050 | 910 | 1.000 | Inparanoid score | I366 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7634 |
OMA | 1 | 1.010 | - | - | QHG46046 | |
OrthoDB | 1 | 1.010 | - | - | D177884at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002706 | |
OrthoInspector | 1 | 1.000 | - | - | otm41196 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104038 | |
Panther | 1 | 1.100 | - | - | O | PTHR48249 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2631 |
SonicParanoid | 1 | 1.000 | - | - | X2492 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.840 |