Sequence 1: | NP_730591.2 | Gene: | skd / 43906 | FlyBaseID: | FBgn0003415 | Length: | 2768 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001074400.1 | Gene: | Med13 / 327987 | MGIID: | 3029632 | Length: | 2171 | Species: | Mus musculus |
Alignment Length: | 2922 | Identity: | 792/2922 - (27%) |
---|---|---|---|
Similarity: | 1192/2922 - (40%) | Gaps: | 932/2922 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 TNGASLEDCHTNFYALTDLCGIKWRKFVNGERPNASSDPL------ADPILRSYSRCIQADMLCV 66
Fly 67 WRRVQSTKTDHADPNALTFEMTTSTKVHPPLSLAAAKELWIFWYGEEPDLSELVDAELLRVAANQ 131
Fly 132 ALWNGTWKGALTYECRSLLFKALHNLMERFVLTKDIVRFGKWFVQPCTSSDRLFGRSSQHLSFSF 196
Fly 197 TFFVHGDT-VCASIDLREHPAVRPLTKEHLTEAAAAFAAASSPPGSNGSAASAGGAVPNPGQDPN 260
Fly 261 GASMDGLDGGEGAAKAAPPPHARKVMLAPFGIAGILTGNSYKASDPIAEKILEDWASFFPL-C-- 322
Fly 323 ------NKDNTDVP----PVVEVVSGGHKMYHPTNYVLVTDLDDMEHMEFVEMQKMQSSVAGAAA 377
Fly 378 ESAVLASLSCPPGAASAPSSMGAAPSATAVPLG----PASLNAPALAGAGVGATASSAAKEISRK 438
Fly 439 AAPQAVSALERLAFQPYYDQRPTSGFTFNTNNTH---IPASAAVEMPERTWQDCVMNTLHVDAAA 500
Fly 501 AAAAVASSTPASGTGSLSADGDENEQNKPPQDSKQLVQQQIQQQQQRQKL--WNFVDPMQKAPCI 563
Fly 564 CTNAQCNSSSSISNISNNKRPQQPLGSPALRAAVTGGSGNKSSSSSSSSSSSSSSSSSYQQQ--- 625
Fly 626 -H--YHQQHLQQQQQQRPGTPVLPATAATSSHHSSSLSNTSASNSSAATPRRHNVPFHKRLLHSL 687
Fly 688 ASTASSTASTFRAKNHSNTTTDTNIPKQRHLGNTP--HGTPHGGASTYSRNSLGGDSSMPVASVE 750
Fly 751 SPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHAPTSVSNLQQPPTPIDHLLDKNTPAPTPTDQH 815
Fly 816 DSKSITASPYVHQTPSVEPPSYTDHAAGGGPAGGQGLGTGPGSVPAQQPATPTAATSAGGAGSGG 880
Fly 881 PSNAIGANAVGTISVKKLEMQ---QQTPSAAMAIKQEP-GAQGRGVGGVTSTTEALNNFKRLYNP 941
Fly 942 PKLTLKDPDSFYDEEWLKEVIYDFQYQEYWDYSTVKRPKMEKQRRPRYAKNLYEGQNHVKPVMPS 1006
Fly 1007 PGSVYGSQLLSLDESASQAGGRGGGGQAAGSSGGGLVGIANSTASGSDVEADGSSFFQGLNIKTE 1071
Fly 1072 PGLHSPSCKETSKSSGGNSSGGGSGSGGNLFTAEGLNPSLNDLEQLFETSSNDECSSVQIHTPPD 1136
Fly 1137 SNNPSNGGCSAVTNTIEDLKRSTAVASAAVAAAAAAAASGAGN------IQAEDLTKMFPTPPSH 1195
Fly 1196 EQQHPNSSPCQTDVVMTDLSVDTTTTIITSSITTTCNTTITSSINTTTTACSNPSNSIMLAAAQA 1260
Fly 1261 PVTVVAIQTVSKMVKQEYNLELG----SPMEEPINDWDYVYRPPQQEKFVGSTRYAPLTNLPSQT 1321
Fly 1322 QPPLTLPTGCFYQPTWSSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQNQQQQ 1386
Fly 1387 QAAAAAAAAASGGVGHQKHQHQHLHDLLSAAPRTPLTPSTVPQPLSSG-GSQYLLNQLNCPQAPP 1450
Fly 1451 GASMQQLMHRAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVASPATSTSSYLNRPL 1515
Fly 1516 HSQEHPHMHGLGGGATGVVGHGTGGGGHMGMVAYTGD-----AGIVSGGTAMAAGSSSLLQELPE 1575
Fly 1576 VNSVLVNILLYDTALNVFRDHNFDSSSVCVCNADTQKIGNIRGADSGVYVPLPGVSFNPFPSGAG 1640
Fly 1641 GALAGQRMLNGPSSAGFGGMRMISAFGGSPASASMPGAGSGHGHGPNGGSNSSSCTPPSSNPHIT 1705
Fly 1706 GYVDDDPVECTCGFSAVVNRRLSHRAGLFYEDEVEITGIADDPGRNKQPTLLSIIQSLSRKNQNK 1770
Fly 1771 QGPGETSSALDKIGAGGLPNGQLEQLGHAVFDLLLDQCSIIQTSSSSVHRALQSHRRRMSRQRRI 1835
Fly 1836 FGNNGA------PTASLASIANVLEFMDAHDVISLALEQSRLAFENQRMDNMMDFHGNGSSSSHQ 1894
Fly 1895 QQQLTAFHAPPPALRHKLAGIGAGRLTVHKWPYLPVGFTRSNKEIVRTMNAIQPMLQNAFHCKSR 1959
Fly 1960 GGSGSKDASSYNTVSGPLTWRQFHRLAGRAS----GQCEPQPIPSVVVGYEKDWISVAPHSIHYW 2020
Fly 2021 DKFLLEPYSYARDVVYVVVCPDNEHVVNCTRSYFRELSSTYEMCKLGKHTPIRG--WDGFLQVGA 2083
Fly 2084 ARNNVPADRETTPLDDWLRTLEHAA-----LAEQIRRYAVAFIHQLAPYLSRVPNDKTLLNPPD- 2142
Fly 2143 ---------------GSGNSHSKGG-------------------------------SSCSSNSSS 2161
Fly 2162 VSGLPGGDLP------------TDNIKLEPGT--EPQVQPMETNEIKQEPGVGKGGTAAGETKP- 2211
Fly 2212 -----TLILGDPLGM---GETLEDINPSAIVLYVVNPFTFAS--DSCELERLALIALLRCYAELL 2266
Fly 2267 KAVPDSVRSQMNIQIISLESVMELGPCGNRKRFSDEIRCLALNIFSQCRRHLVHAQSVKSLTGFG 2331
Fly 2332 TAANMEAFLKTKDEPNRRAYKMYTAPFVLAPMHERNDKTDFSRSAGSMHGQNEHRYSVMYCNYCL 2396
Fly 2397 SEDQAWLLATATDERGEMLEKICINIDVPNRARRRKAPARYVALKKLMDFIMGIISQTSQMWRLV 2461
Fly 2462 IGRIGRIGHSELKSWSFLLSKQQLQKASKQFKDMCKQCTLMY--PPTILSACLVTLEPDAKLRVM 2524
Fly 2525 PDQFTPDERFSQ---ISMQNP-LATPQDVTCTHILVFPTSAVCAPFTRQFQNEPQVDDDFLTFEE 2585
Fly 2586 EGNEDFSDA-------DIGDLFWDTHMDRV---------SNHGSPGRMDDNRSWQSAGGNNFKCT 2634
Fly 2635 PPQEVEEVGSLNQQPISVGYMVSTAPTGRMPAWFWSACPHLEDVCPVFLKTALHLHVPSIQSADD 2699
Fly 2700 ILNSTNAHQSGNDHPLDSNLTADVLRFVLEGYNALSWLALDSNTHDRLSCLPINVQTLMDLY 2761 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
skd | NP_730591.2 | Med13_N | 15..490 | CDD:288451 | 151/501 (30%) |
Med13_C | 2234..2755 | CDD:283892 | 227/544 (42%) | ||
Med13 | NP_001074400.1 | Med13_N | 14..384 | CDD:288451 | 151/501 (30%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 318..339 | 5/23 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 434..476 | 10/41 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 711..733 | 5/21 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 746..768 | 7/35 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 786..820 | 12/63 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 957..1053 | 33/146 (23%) | |||
LXXLL motif 1 | 1187..1191 | 0/3 (0%) | |||
LXXLL motif 2 | 1278..1282 | 1/3 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1483..1503 | 2/19 (11%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1532..1626 | 20/95 (21%) | |||
Med13_C | 1637..2158 | CDD:283892 | 227/544 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2012..2042 | 5/29 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838858 | |
Domainoid | 1 | 1.000 | 332 | 1.000 | Domainoid score | I1141 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3600 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H21067 | |
Inparanoid | 1 | 1.050 | 915 | 1.000 | Inparanoid score | I361 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7634 |
OMA | 1 | 1.010 | - | - | QHG46046 | |
OrthoDB | 1 | 1.010 | - | - | D177884at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002706 | |
OrthoInspector | 1 | 1.000 | - | - | otm43261 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104038 | |
Panther | 1 | 1.100 | - | - | O | PTHR48249 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2631 |
SonicParanoid | 1 | 1.000 | - | - | X2492 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.840 |