DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment syd and Spag9

DIOPT Version :9

Sequence 1:NP_524652.1 Gene:syd / 43905 FlyBaseID:FBgn0024187 Length:1227 Species:Drosophila melanogaster
Sequence 2:XP_006534273.1 Gene:Spag9 / 70834 MGIID:1918084 Length:1343 Species:Mus musculus


Alignment Length:1413 Identity:588/1413 - (41%)
Similarity:792/1413 - (56%) Gaps:265/1413 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MDNDDALLNNGGP-QSGAETVYGTEDNNMVMSEKNEQVVSIVQQLAGSIYQEFERMINRYDEDVV 65
            |:.:|.::....| .|||           ||||:       |..||||||:||||:|.||||:||
Mouse     1 MELEDGVVYQEEPGGSGA-----------VMSER-------VSGLAGSIYREFERLIGRYDEEVV 47

  Fly    66 KNLMPLLVNVLECLDASYRINQEQDVEVELLREDNEQLVTQYEREKSARKQSEQKLLEAEDLAEQ 130
            |.||||:|.|||.||:.:..:||..||:||||:|||||:|||||||:.||.:|:|.:|.||..||
Mouse    48 KELMPLVVAVLENLDSVFAQDQEHQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQ 112

  Fly   131 ENKELATRLESVESIVRMLELKHKNSLEHASRLEEREADLKKEYNKLHERYTELFKNHVDYMERT 195
            |.|:|.||:||:||..|.||||.||..:..||||||||:||||||.||:|:||:..|:::::|||
Mouse   113 EKKDLQTRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERT 177

  Fly   196 KM--LMGSTHSQMSTASERMDVSRARLNPVARSSGPVSYGFASLENSVMLDTETICSVGSQSDDS 258
            |:  |.||...: :||..|:...|    |::....|:..|...|........||..|...:..:.
Mouse   178 KLHQLSGSDQLE-ATAHSRIRKER----PISLGIFPLPAGDGLLTPDTQKGGETPGSEQWKFQEL 237

  Fly   259 GPPSLQNEL------DNLSGTLERGAATDALQQQHHATSPQS---PDSSPVVPNVPT-------- 306
            ..|.....|      :.|....:....:|..|....||:|.|   .|.|.:.|:.|:        
Mouse   238 SQPRSHTSLKVSHSPEPLKAVEQEDELSDISQGGSKATTPASTANSDVSAIPPDTPSKEDNEGFV 302

  Fly   307 ------------------------NVGRSTTKKEQRS--------------DNNL---------- 323
                                    ||...:.:.|::|              |.:|          
Mouse   303 KGTDTSNKSEISKHIEVQVAQETRNVSTESGENEEKSEVQAIIESTPELDMDKDLSGYKGSSTPT 367

  Fly   324 --YQELSFQDNEESEENEIVT-GSWVHP---------GEYASSANDNYFGMGKEVENLIMENNEL 376
              .:..:|..|.||...|:.: ||.:..         |||   ::.|:||||:||||||:||.:|
Mouse   368 KGIENKAFDRNTESLFEELSSAGSGLIGDVDEGADLLGEY---SDHNFFGMGREVENLILENTQL 429

  Fly   377 LATKNALNIVKDDLIVKVDELTGEVEIVREELNAMQQSRTKLRQRISELEDELKKAK---EQVKQ 438
            |.||||||:||:|||.||||||.|.::::.||.|::|::.||..:..|||:||:||:   |..:|
Mouse   430 LETKNALNVVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEDKNRELEEELRKARAEAEDARQ 494

  Fly   439 QNTEQEENDVPLAQRKRFTRVEMAMVLMERNQYKERLMELQEAVRLTEILRASRTVDNLDRKSKQ 503
            :..:.:::|:|.||||||||||||.||||||||||||||||||||.||::||||....:..|.:.
Mouse   495 KAKDDDDSDIPTAQRKRFTRVEMARVLMERNQYKERLMELQEAVRWTEMIRASRENPAMQEKKRS 559

  Fly   504 SIWKYFSNLFTPSNRPTERVADGLGGGPMFRHTGGGSPAHSHGSPS---RGSGGGDNRLALTSGQ 565
            |||::||.||:.|:..|::....:       :....:|. ||.:||   |.|         |..|
Mouse   560 SIWQFFSRLFSSSSNATKKPEPPV-------NLKYNAPT-SHVTPSVKKRSS---------TLSQ 607

  Fly   566 PPVHPASAGLANALIMPKDYAEEGSSERISARR---REQYRQLRAHVQKEDGRLHAYGWSLPINK 627
            .|...:.|         .|:..|.:...:::||   ||||||::|||||||||:.|:||||| .|
Mouse   608 LPGDKSKA---------FDFLSEETEASLASRREQKREQYRQVKAHVQKEDGRVQAFGWSLP-QK 662

  Fly   628 ASQEANPNRHS--GGVPVPVYCNPLAEASPHMKVFCAAGVNLHGGFTKNGQSLIPANSPYAPKST 690
            ..|.||....:  ..:|||||..||.|....||::||.||||.||.|::|.|::.|:..|...:.
Mouse   663 YKQVANGQGETKMKNLPVPVYLRPLDEKDASMKLWCAVGVNLSGGKTRDGGSVVGASVFYKDIAG 727

  Fly   691 LKIAEITSPTADQ-SMEALDRQMARVSLETLEPETQLSSFVWICTSTHAASTVSVVDANQSATVL 754
            |........:|.| |::.||:::.....| .:.:.:|||.||||||||:.:.|.::||.|...:|
Mouse   728 LDTEGSKQRSASQSSLDKLDQELKEQQKE-FKNQEELSSQVWICTSTHSTTKVIIIDAVQPGNIL 791

  Fly   755 DAFPICASHLLCIASVQGAMESDY----ALLEQSEVVKA---GEMLQR-PGEGTELLGKVEFVRV 811
            |:|.:|.||:||||||.||.|:||    .|.|..:|.||   |.|... ..|...|||.:..|..
Mouse   792 DSFTVCNSHVLCIASVPGARETDYPAGEELSESGQVDKASLCGSMTSNSSAEMDSLLGGITVVGC 856

  Fly   812 ----------------------KPKSDDEQNSN-EKQQQEEEEAKEATE---KSNEQL-----PA 845
                                  ||...:.:||. ::.....|||.||||   .|.|..     |.
Mouse   857 STEGLTGAATSPSTNGASPVIEKPPEMETENSEVDENIPTAEEATEATEGNAGSTEDTVDISQPG 921

  Fly   846 VSAE----EPLGNVEAIKIRQPLPGAPQRLSTDGNQTNNNNNSSSSSNLLFATKSLNPILETKDR 906
            |..|    :|||    ::|.:.|....|              ||:.|::.....|:.|..:...|
Mouse   922 VYTEHVFTDPLG----VQIPEDLSPVFQ--------------SSNDSDVYKDQISVLPNEQDLAR 968

  Fly   907 DE-PAMSSVGPTMWLGAQDGWLYVHSSVGRWHECLHRVLLPDAVLAIVHVEARVVVALANAQLAV 970
            :| ..|||:.||||||||:|.|||||||.:|.:|||.:.|.|::|:||||:..|:||||:..||:
Mouse   969 EEAQKMSSLLPTMWLGAQNGCLYVHSSVAQWRKCLHSIKLKDSILSIVHVKGIVLVALADGTLAI 1033

  Fly   971 FRRQTDGQWDLNSYHLVTLGDRNHSIRCLCVAGERIWAAHRNKIFIVDPVSLNIVHSLDAHPRKE 1035
            |.|..||||||::|||:.||..:|||||:.|..:::|..:||||::|.|.::.|..|.|||||||
Mouse  1034 FHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVHDKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKE 1098

  Fly  1036 SQVRQMAATGAGVWVSIRLDSTLRLYNTHTFEHKQDVDIEPYVSKMLGTGKLGFSFVRITALMVS 1100
            |||||:|..|.|||||||||||||||:.||::|.|||||||||||||||||||||||||||||||
Mouse  1099 SQVRQLAWVGDGVWVSIRLDSTLRLYHAHTYQHLQDVDIEPYVSKMLGTGKLGFSFVRITALMVS 1163

  Fly  1101 CNRLWIGTSNGVIISVPLAEV------------QPKSSSDPHGQ--------------------- 1132
            |||||:||.||||||:||.|.            ..|:|..|..:                     
Mouse  1164 CNRLWVGTGNGVIISIPLTETVILHQGRLLGLRANKTSGTPGNRPGSVIRVYGDENSDKVTPGTF 1228

  Fly  1133 MPLCCMANAQLSFHGHRDAVKFFVSVP--MLQQPNLNGGLTFT------------NKRP--DMLV 1181
            :|.|.||:|||.||||||||||||:||  ::...:.:||...|            ::.|  .|||
Mouse  1229 IPYCSMAHAQLCFHGHRDAVKFFVAVPGQVISPQSSSGGADLTADKAGSSAQEPSSQTPLKSMLV 1293

  Fly  1182 MCGGEGYIDFRINDNDMEN-----SIQLEPNQTIENRGDKSYLIVWHV 1224
            :.|||||||||:.|...|:     .:.|||:.|   :.::|:||||.|
Mouse  1294 ISGGEGYIDFRMGDEGGESELLGEDLPLEPSVT---KAERSHLIVWQV 1338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sydNP_524652.1 Jnk-SapK_ap_N 43..196 CDD:286787 95/152 (63%)
JIP_LZII 362..430 CDD:293080 40/67 (60%)
Vps53_N 374..>524 CDD:282020 85/152 (56%)
Spag9XP_006534273.1 SbcC 22..>539 CDD:223496 222/531 (42%)
Jnk-SapK_ap_N 25..178 CDD:370653 95/152 (63%)
JIP_LZII 415..483 CDD:374561 40/67 (60%)
DUF5401 <458..>651 CDD:375164 93/218 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849585
Domainoid 1 1.000 613 1.000 Domainoid score I191
eggNOG 1 0.900 - - E1_KOG2077
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2954
Inparanoid 1 1.050 871 1.000 Inparanoid score I412
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49339
OrthoDB 1 1.010 - - D165438at33208
OrthoFinder 1 1.000 - - FOG0004823
OrthoInspector 1 1.000 - - otm43471
orthoMCL 1 0.900 - - OOG6_104719
Panther 1 1.100 - - O PTHR13886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4614
SonicParanoid 1 1.000 - - X2032
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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