DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment syd and Mapk8ip3

DIOPT Version :9

Sequence 1:NP_524652.1 Gene:syd / 43905 FlyBaseID:FBgn0024187 Length:1227 Species:Drosophila melanogaster
Sequence 2:XP_006246015.1 Gene:Mapk8ip3 / 302983 RGDID:1563691 Length:1345 Species:Rattus norvegicus


Alignment Length:1426 Identity:573/1426 - (40%)
Similarity:745/1426 - (52%) Gaps:307/1426 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QSGAETVYGTED--NNMVMSEKNEQVVSIVQQLAGSIYQEFERMINRYDEDVVKNLMPLLVNVLE 77
            :.|...|| .:|  :..||||:       |..||||||:||||:|:.|||:|||.||||:|||||
  Rat     8 EGGGVVVY-QDDYCSGSVMSER-------VSGLAGSIYREFERLIHCYDEEVVKELMPLVVNVLE 64

  Fly    78 CLDASYRINQEQDVEVELLREDNEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELATRLESV 142
            .||:....|||.:||:||||||||||:|||||||:.|||:|:|.:|.||..|||.|||..::|..
  Rat    65 NLDSVLSENQEHEVELELLREDNEQLLTQYEREKALRKQAEEKFIEFEDALEQEKKELQIQVEHY 129

  Fly   143 ESIVRMLELKHKNSLEHASRLEEREADLKKEYNKLHERYTELFKNHVDYMERTKMLM----GSTH 203
            |...|.||||.||..:..|||||||:::|||||.||:|:||:.:.:|:::||:||..    |.|.
  Rat   130 EFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQRHTEMIQTYVEHIERSKMQQVGGGGQTE 194

  Fly   204 SQMSTASERMDVSRARL-NPVARSSGPVSYGFASLENSVML----DTETICSVGSQSDDSGPPSL 263
            |.:...|.|....::|. .|.:.:..|::.|....:....|    |...:..:|.....|   |.
  Rat   195 SSLPGRSPRQSWRKSRKERPTSLNVFPLADGMVRAQMGGKLVPAGDHWHLSDLGQLQSSS---SY 256

  Fly   264 QNELDNLSGTLERGAATDALQQQHHATSPQSPDSS-PVVPNVPTNVG-------RSTTK-----K 315
            |...|.:|   |.|.::.|.......|...:|.|| |.....|.|..       .|.||     :
  Rat   257 QCPNDEMS---ESGQSSAAATPSTTGTKSNTPTSSVPSAAVTPLNESLQPLGDYGSVTKNNKRAR 318

  Fly   316 EQRSDNNLYQELSFQ----------DNEESEENEIV----------------------------- 341
            |:|:..|:..:::.:          .:|.|:..:|:                             
  Rat   319 EKRNSRNMEVQVTQEMRNVSIGMGSSDEWSDVQDIIDSTPELDVCPETRLDRTGSSPTQGIVNKA 383

  Fly   342 ----TGSWVHP-------------------GEYASSANDNYFGMGKEVENLIMENNELLATKNAL 383
                |.|..|.                   ||:  |..|::|||||||.||::||::||.|||||
  Rat   384 FGINTDSLYHELSTAGSEVIGDVDEGADLLGEF--SVRDDFFGMGKEVGNLLLENSQLLETKNAL 446

  Fly   384 NIVKDDLIVKVDELTGEVEIVREELNAMQQSRTKLRQRISELEDELKKAK-EQVKQQNTEQEE-- 445
            |:||:|||.|||:|:||.|:::.||.|.:|::.||..||.|||:|||:.| |.|..:...:||  
  Rat   447 NVVKNDLIAKVDQLSGEQEVLKGELEAAKQAKVKLENRIKELEEELKRVKSEAVTARREPREEVE 511

  Fly   446 ----------NDVPLAQRKRFTRVEMAMVLMERNQYKERLMELQEAVRLTEILRASRTVDNLDRK 500
                      :.:|:|||:||||||||.||||||||||||||||||||.||::||||...::..|
  Rat   512 DVSSYLCTELDKIPMAQRRRFTRVEMARVLMERNQYKERLMELQEAVRWTEMIRASREHPSVQEK 576

  Fly   501 SKQSIWKYFSNLFTPSNRPTERVADGLGGGPMFRHTGGGSPAHSHGSPSRGSGGGDNRLALTSGQ 565
            .|.:||::||.||:.|:.|           |..:.:......| :.||:..........||..  
  Rat   577 KKSTIWQFFSRLFSSSSSP-----------PPAKRSYPSVNIH-YKSPTTAGFSQRRNHALCQ-- 627

  Fly   566 PPVHPASAGLANALIMPKDYAEEGSSERISARR---REQYRQLRAHVQKEDGRLHAYGWSLPINK 627
                 .|||.......|.|....      ||||   ||||||:|.||:.:||||.|.|||||.. 
  Rat   628 -----ISAGSRPLEFFPDDDCTS------SARREQKREQYRQVREHVRNDDGRLQACGWSLPAK- 680

  Fly   628 ASQEANPNRHSGG--------VPVPVYCNPLAEASPHMKVFCAAGVNLHG-----GFTKNGQSLI 679
             .::.:||   ||        |||||||.||.|..|..|::|||||||.|     ..:.||....
  Rat   681 -YKQLSPN---GGQEDTRMKNVPVPVYCRPLVEKDPSTKLWCAAGVNLSGWKPNEEDSSNGPKPA 741

  Fly   680 PANSPYA--------PKSTLKIAEITSPTADQSMEALDRQMARVSLETLEPETQ-LSSFVWICTS 735
            |...|..        ||||     ..||...::.|.              ||.. .||.|||.||
  Rat   742 PGRDPLTCDREGEGEPKST-----HPSPEKKKAKEV--------------PEADATSSRVWILTS 787

  Fly   736 THAASTVSVVDANQSATVLDAFPICASHLLCIASVQGAMESDYA---LLEQSEV---------VK 788
            |...|.|.::||||..||:|.|.:|.:|:|||:|:..|.:|||.   :...|:|         |.
  Rat   788 TLTTSKVVIIDANQPGTVVDQFTVCNAHVLCISSIPAASDSDYPPGDMFLDSDVNPEDSGADGVL 852

  Fly   789 AGEML-------QRPGEGTELLGKVEFVRVKPKSDDEQNSNEK--QQQEEEEAKEATEKSNEQLP 844
            ||..|       ..|.......|... |..|.:.|....:|.|  ..|..|||.||||     :|
  Rat   853 AGITLVGCATRCNVPRSNCSSRGDTP-VLDKGQGDVAATANGKVNPSQSTEEATEATE-----VP 911

  Fly   845 AVSAEEPLGNVEAIKIRQ-PL-------PGAPQRLSTDGNQTNNNNNSSSSSNLLFATKSLNPIL 901
            .....|.    ||..:|. ||       |...|..||   |..:.|.|.|..::      :.|.:
  Rat   912 DPGPSES----EATTVRPGPLTEHVFTDPAPTQSSST---QPASENGSESDGSI------VQPQV 963

  Fly   902 ETKDRDEPAMSSVGPTMWLGAQDGWLYVHSSVGRWHECLHRVLLPDAVLAIVHVEARVVVALANA 966
            |.........||..||||||||:|||||||:|..|.:|||.:.|.|:||::|||:.||:||||:.
  Rat   964 EPSGESSATTSSAAPTMWLGAQNGWLYVHSAVANWKKCLHSIKLKDSVLSLVHVKGRVLVALADG 1028

  Fly   967 QLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCLCVAGERIWAAHRNKIFIVDPVSLNIVHSLDAH 1031
            .||:|.|..||||||::|||:.||..:|||||:.|..:|:|..::||:.::.|.::.|..|.|||
  Rat  1029 TLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVDDRVWCGYKNKVHVIQPKTMQIEKSFDAH 1093

  Fly  1032 PRKESQVRQMAATGAGVWVSIRLDSTLRLYNTHTFEHKQDVDIEPYVSKMLGTGKLGFSFVRITA 1096
            ||:||||||:|..|.|||||||||||||||:.||.:|.|||||||||||||||||||||||||||
  Rat  1094 PRRESQVRQLAWIGDGVWVSIRLDSTLRLYHAHTHQHLQDVDIEPYVSKMLGTGKLGFSFVRITA 1158

  Fly  1097 LMVSCNRLWIGTSNGVIISVPLAE----------------VQPKS----------------SSDP 1129
            |:::.||||:||.|||:||:||.|                ..|.|                |||.
  Rat  1159 LLIAGNRLWVGTGNGVVISIPLTETVVLHRGQLLGLRANKTSPTSGEGTRPGGIIHVYGDDSSDK 1223

  Fly  1130 HGQ--MPLCCMANAQLSFHGHRDAVKFFVSVPMLQQPNLNGGLTFT----------------NKR 1176
            ...  :|.|.||.|||.|||||||||||||||......|||.:..:                .|.
  Rat  1224 TASSFIPYCSMAQAQLCFHGHRDAVKFFVSVPGNVLATLNGSVLDSPSEGPGPAAPAADAEGQKL 1288

  Fly  1177 PDMLVMCGGEGYIDFRINDNDMENSIQLEPNQTIENRGD------------KSYLIVWHVS 1225
            .:.||:.||||||||||.|.        |.::|.|..||            :|::|||.||
  Rat  1289 KNALVLSGGEGYIDFRIGDG--------EDDETEEGTGDVNQTKPSLSKAERSHIIVWQVS 1341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sydNP_524652.1 Jnk-SapK_ap_N 43..196 CDD:286787 93/152 (61%)
JIP_LZII 362..430 CDD:293080 41/67 (61%)
Vps53_N 374..>524 CDD:282020 87/162 (54%)
Mapk8ip3XP_006246015.1 Jnk-SapK_ap_N 30..183 CDD:286787 93/152 (61%)
TPR_MLP1_2 61..167 CDD:285204 65/105 (62%)
JIP_LZII 425..493 CDD:293080 41/67 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353235
Domainoid 1 1.000 603 1.000 Domainoid score I185
eggNOG 1 0.900 - - E1_KOG2077
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 871 1.000 Inparanoid score I394
OMA 1 1.010 - - QHG49339
OrthoDB 1 1.010 - - D165438at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45535
orthoMCL 1 0.900 - - OOG6_104719
Panther 1 1.100 - - LDO PTHR13886
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2032
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

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