DRSC/TRiP Functional Genomics Resources

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Protein Alignment syd and mapk8ip3

DIOPT Version :9

Sequence 1:NP_524652.1 Gene:syd / 43905 FlyBaseID:FBgn0024187 Length:1227 Species:Drosophila melanogaster
Sequence 2:NP_001289173.1 Gene:mapk8ip3 / 100318355 ZFINID:ZDB-GENE-090303-6 Length:1299 Species:Danio rerio


Alignment Length:1412 Identity:550/1412 - (38%)
Similarity:753/1412 - (53%) Gaps:326/1412 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ETVYGTEDNNMVMSEKNEQVVSIVQQLAGSIYQEFERMINRYDEDVVKNLMPLLVNVLECLDASY 83
            |.||  :|:...:|..:|:|..    ||.||||||||:|..|||:|||.||||:|||||.||:..
Zfish     5 EVVY--QDDYGAVSVMSERVTG----LASSIYQEFERLIKTYDEEVVKELMPLVVNVLENLDSVL 63

  Fly    84 RINQEQDVEVELLREDNEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELATRLESVESIVRM 148
            ..|||.:||:|||:||||||:|||||||:.|||:|:|.:|.||..|.:.|:|.|.:|::|...:.
Zfish    64 TENQEHEVELELLKEDNEQLITQYEREKALRKQAEEKFIEFEDALEADKKDLQTTVETLELQAKQ 128

  Fly   149 LELKHKNSLEHASRLEEREADLKKEYNKLHERYTELFKNHVDYMERTKMLMGSTHSQMSTASERM 213
            ||||.||..:..|||||||:|:|||||.||:|:||:.:.:|:::||:|:....::...||...|.
Zfish   129 LELKSKNYADQISRLEERESDMKKEYNALHQRHTEMIQTYVEHIERSKLQQSGSNQSESTGCGRS 193

  Fly   214 DVSRARLNPVARSSGPVSYGFASLENSVMLDTETICSVGSQSDDSGPPSLQNELDNLSGTLERGA 278
            .....|.:...|                                  ||||  .|......:|.|:
Zfish   194 QRHNWRKSKTER----------------------------------PPSL--SLYPGGDGMEDGS 222

  Fly   279 ATDALQQQHHATSPQSPDSSPVVPN---VPTN-----VGRSTTK----KEQRSDNNLYQELSFQD 331
            .:|::.....:|..:|...:..||:   .|.|     ||...|.    :::|:...|.:.:..|.
Zfish   223 DSDSVAATPSSTGSKSNTPTSSVPSATVTPLNDGLVSVGEYDTSRGRARDRRTGKRLSRNMEVQV 287

  Fly   332 NEE--------------SEENEIV---------------------------------TGSWVHP- 348
            ::|              ||..||:                                 |.|..|. 
Zfish   288 SQETRNVSIGMGSSDEWSEFQEIIDSTPELDMCLDPRIFGGGNSPSQGIVNEAFGINTDSLYHEI 352

  Fly   349 ------------------GEYASSANDNYFGMGKEVENLIMENNELLATKNALNIVKDDLIVKVD 395
                              ||:  |..|::||||||||||:.||.:||.|||||||||:|||.|||
Zfish   353 KDAKSDIIGDVDAGAELLGEF--SVRDDFFGMGKEVENLLTENKQLLETKNALNIVKNDLIAKVD 415

  Fly   396 ELTGEVEIVREELNAMQQSRTKLRQRISELEDELKKAKEQV--KQQNTEQE---------ENDVP 449
            ||:.|.|::||||.:::||:||:.||:.|||:|||:.:.:.  ..|:::.|         ::||.
Zfish   416 ELSSEQEVLREELESVKQSKTKVDQRVKELEEELKRLRAEALGASQDSKDEGGEDYSSPLQDDVT 480

  Fly   450 LAQRKRFTRVEMAMVLMERNQYKERLMELQEAVRLTEILRASRTVDNLDRKSKQSIWKYFSNLFT 514
            :.||:|||:||||.||||||||||||||||||||.||::||||....|..|.|..||::|:.||:
Zfish   481 MTQRRRFTQVEMARVLMERNQYKERLMELQEAVRWTEMIRASRESPPLPEKKKSIIWQFFARLFS 545

  Fly   515 PSNRPTERVADGLGGGPMFR-------HTGGGSPAHSHGSPSRGSGGGDNRLALTSGQPPVHPAS 572
            .|..|.          |:.|       |....|||           |.:.|.:.|..|       
Zfish   546 SSASPP----------PVKRPYTSVNIHYKSPSPA-----------GYNQRRSQTMCQ------- 582

  Fly   573 AGLANALIMPKDYAEEGSSERISAR--RREQYRQLRAHVQKEDGRLHAYGWSLPI---------- 625
              ::.:..: :::..|..|...:.|  |||||||:|.|::::||.:...|||:|.          
Zfish   583 --ISTSTCI-REFLPEDDSALCTRREQRREQYRQVREHMRRKDGPMQTCGWSVPSRLKQNGCQAD 644

  Fly   626 ---------NKASQEANPNRHSGGVPVPVYCNPLAEASPHMKVFCAAGVNLHGGFTKNGQ--SLI 679
                     |:|: |...||.. .|||||||.||.|..|:.|::|||||:|.|..|.:.:  |:.
Zfish   645 SAPDATAKRNQAT-EKEDNRMK-NVPVPVYCRPLVEKDPNRKLWCAAGVDLTGWKTSSQEAASVK 707

  Fly   680 PANSPYAPKSTLKIAEITSP-TADQSMEALDRQMARVSLETLEP----ETQ-LSSFVWICTSTHA 738
            |:|.             :.| ||:.  |..|.:..:.|.|..:|    ||. :||.|||.||||:
Zfish   708 PSNG-------------SDPLTAEN--EGGDGKSEQSSPEKKKPKELHETDPVSSRVWILTSTHS 757

  Fly   739 ASTVSVVDANQSATVLDAFPICASHLLCIASVQGAMESDYALLEQSEVVKAGEML--QRPGEG-T 800
            ||.|.::|||...:::|.|.:|.:|:|||:||..|.||||         .|||:.  |:.|:| :
Zfish   758 ASKVVIIDANLPCSLVDQFNVCNAHVLCISSVPAASESDY---------PAGEIFLEQQAGDGAS 813

  Fly   801 ELLGKVEFV----------------------RVKPKSDDEQNS-------NEKQQQEEEEAKEAT 836
            |..|.||.:                      |......|..|:       :....|..|||.||.
Zfish   814 EEKGGVEGMLAGITIVGCATNCSVVRSNCSSRTDTPVQDRSNAPTAPVCRSLAVSQSAEEATEAI 878

  Fly   837 EKSNEQLPAVSAEEPLGNVEAIKIRQPLPGAPQRLSTDGNQTNNNNNSSSSSNLLFATKSLNPIL 901
            |.:.|..|:.:|:..||:.            .:.:.||        |:.|...:.....|..|..
Zfish   879 EVTEEAGPSENADSTLGSF------------TEHVFTD--------NTHSEPGVAKEKVSSAPAD 923

  Fly   902 ETKDRDEPAMSSVGPTMWLGAQDGWLYVHSSVGRWHECLHRVLLPDAVLAIVHVEARVVVALANA 966
            ..:..||.|.:|..||||||||:|||||||:|..|.:|||.:.|.|:||::|||:.||:||||:.
Zfish   924 SEEAADERAGTSAAPTMWLGAQNGWLYVHSAVSNWKKCLHSIKLKDSVLSLVHVKGRVLVALADG 988

  Fly   967 QLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCLCVAGERIWAAHRNKIFIVDPVSLNIVHSLDAH 1031
            .||:|.|..||||||::|||:.||..:|||||:.|..:::|..::|||.::.|.|:.|..|.|||
Zfish   989 TLAIFHRSEDGQWDLSNYHLMDLGRPHHSIRCMAVVHDKVWCGNKNKIHVIQPKSMQIEKSFDAH 1053

  Fly  1032 PRKESQVRQMAATGAGVWVSIRLDSTLRLYNTHTFEHKQDVDIEPYVSKMLGTGKLGFSFVRITA 1096
            |||||||||:|..|.|||||||||||||||:.||.:|.|||||||||||||||||||||||||||
Zfish  1054 PRKESQVRQLAWIGDGVWVSIRLDSTLRLYHAHTHQHLQDVDIEPYVSKMLGTGKLGFSFVRITA 1118

  Fly  1097 LMVSCNRLWIGTSNGVIISVPLAE----------------VQPKSS------------SDPHGQM 1133
            |::..||||:||.||||||:||.|                |.|.||            |:....:
Zfish  1119 LLIGGNRLWVGTGNGVIISIPLTETVVLHRGQLLGLRANKVSPTSSGGVIHVYADDSTSEKSSFI 1183

  Fly  1134 PLCCMANAQLSFHGHRDAVKFFVSVPMLQQPNLNGGL---------------TFTNKRPDMLVMC 1183
            |.|.||.|||.|||||||||||||||......|||.:               |......::||:.
Zfish  1184 PYCSMAQAQLCFHGHRDAVKFFVSVPGNVLATLNGSVLDSPSESQGSSAPAETEAQSLQNVLVLS 1248

  Fly  1184 GGEGYIDFRINDNDMENSIQLEPNQTIE-----NRGDKSYLIVWHVS 1225
            ||||||||||.|.:.:.:.:.:.::..:     ::.::|::|||.||
Zfish  1249 GGEGYIDFRIGDGEDDETEEADDDEAPQMKPALSKAERSHIIVWQVS 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sydNP_524652.1 Jnk-SapK_ap_N 43..196 CDD:286787 90/152 (59%)
JIP_LZII 362..430 CDD:293080 45/67 (67%)
Vps53_N 374..>524 CDD:282020 86/160 (54%)
mapk8ip3NP_001289173.1 Jnk-SapK_ap_N 24..176 CDD:286787 90/155 (58%)
TPR_MLP1_2 54..160 CDD:285204 62/105 (59%)
JIP_LZII 382..450 CDD:293080 45/67 (67%)
Uso1_p115_C 392..513 CDD:282695 69/120 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595322
Domainoid 1 1.000 567 1.000 Domainoid score I223
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 798 1.000 Inparanoid score I484
OMA 1 1.010 - - QHG49339
OrthoDB 1 1.010 - - D165438at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25756
orthoMCL 1 0.900 - - OOG6_104719
Panther 1 1.100 - - LDO PTHR13886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17302
SonicParanoid 1 1.000 - - X2032
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.940

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