DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and YPL150W

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_015175.1 Gene:YPL150W / 855953 SGDID:S000006071 Length:901 Species:Saccharomyces cerevisiae


Alignment Length:639 Identity:159/639 - (24%)
Similarity:259/639 - (40%) Gaps:158/639 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHP 86
            |.::|:|.:...:|.|:||||.:..|:.|..||.:|..::..       ..|.||:...:.|..|
Yeast    35 LTEVGNYKILKQIGEGSFGKVYLALHRPTHRKVCLKTSDKND-------PNIVREVFYHRQFDFP 92

  Fly    87 HIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRD 151
            :|.|||:||.|.|.::|.:||..|.||:|:::...::...:....|.||...|.|.|....||||
Yeast    93 YITKLYEVIVTESKVWMALEYCPGKELYDHLLSLRRISLLECGELFAQISGAVYYAHSMHCVHRD 157

  Fly   152 LKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVIL 216
            ||.||:|||.|.:.|:.|||.:...:....|.|.||:..|.|||:|..:.|.|.::||||.||||
Yeast   158 LKLENILLDKNGNAKLTDFGFTRECMTKTTLETVCGTTVYMAPELIERRTYDGFKIDIWSLGVIL 222

  Fly   217 YALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVV----NLVCQMLQVDPLKRANIEEIKKH 277
            |.|:.|.|||||:.......||   :...|:|..|.:.    :|:.::|..:|.:|.::.::.:|
Yeast   223 YTLITGYLPFDDDDEAKTKWKI---VNEEPKYDAKVIPDDARDLISRLLAKNPGERPSLSQVLRH 284

  Fly   278 EWFQKDLPAYL----------------FPSSIEQ------DSNVIDTYAVAEVCTK--------- 311
            .:.|......|                |.|.:|:      ..:.:||.|:.:...|         
Yeast   285 PFLQPYGSVVLDQTQKILCRQRSGGTQFKSKLERRLLKRLKQSGVDTQAIKQSILKKKCDSLSGL 349

  Fly   312 -----------------------FGVK---ETEVHNSL--LSGD---PHDQLAIAYHLI------ 339
                                   ..||   |:..||..  :|.|   |..:|:.|..|.      
Yeast   350 WLLLLAQGKKQENCKYPKRSRSVLSVKKVIESATHNDTNGISEDVLKPSLELSRAASLSKMLNKG 414

  Fly   340 ---------IDNKRFADDAA---------------------------NQINEINNFFVAGSPPPP 368
                     :..|:..|.|.                           |.:.::::||.:      
Yeast   415 SDFVTSMTPVSRKKSKDSAKVLNPTLSKISSQRAYSHSIAGSPRKSNNFLQKVSSFFKS------ 473

  Fly   369 PPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPSSTIPIRPHPERIAPMRDRQLA 433
                 .:||..:........|.....||:          .|.|||...::.:...|...|...:|
Yeast   474 -----KKSSNSNSNNSIHTNVSESLIASN----------RGAPSSGSFLKKNSGSIQKSRTDTVA 523

  Fly   434 MSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRS-QSKPNDIMLEVYRAMKALSYEWKIINPYHVR 497
            ...:|...|:..|..|  |..:.|:..:..:.: ::..|:|.|:|  |.:.|..|       |:|
Yeast   524 NPSRTESIGSLNENVA--GAIVPRSANNTTLENKKTSGNEIGLKV--APELLLNE-------HIR 577

  Fly   498 VRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPL 551
            :....:|..| |.:|.::.|....:|  |.:|..|......|.    .::|||:
Yeast   578 IEEPRLKRFK-SSISSEISQTSTGNY--DSESAENSRSISFDG----KVSPPPI 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 92/258 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521 19/144 (13%)
AMPKA_C 457..580 CDD:213378 23/96 (24%)
YPL150WNP_015175.1 STKc_AMPK-like 40..286 CDD:270905 91/255 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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