DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and HRK1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014910.1 Gene:HRK1 / 854441 SGDID:S000005793 Length:759 Species:Saccharomyces cerevisiae


Alignment Length:274 Identity:74/274 - (27%)
Similarity:109/274 - (39%) Gaps:53/274 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LGATLGTGTFGKVKIGEHQITRVKVAVKILNRQK----IKSLDVVGKIRREIQNLKLFRHPHIIK 90
            ||..||:|..|.||:..........|||....:|    :|  :...|...|........||::|:
Yeast   217 LGKLLGSGAGGSVKVLVRPTDGATFAVKEFRPRKPNESVK--EYAKKCTAEFCIGSTLHHPNVIE 279

  Fly    91 LYQVI--STPSDIFMIMEYVSGGELFDY--IVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRD 151
            ...|.  |..:..:.:|||..    .|:  :|..||:...:.....:|:..||.|.|...:.|||
Yeast   280 TVDVFSDSKQNKYYEVMEYCP----IDFFAVVMTGKMSRGEINCCLKQLTEGVKYLHSMGLAHRD 340

  Fly   152 LKPENLLLDHNMHVKIADFGLSNMML----DGEFLRTS-CGSPNYAAPEVI-SGKLYAGPEVDIW 210
            ||.:|.::.....:|:.|||.:.:..    ||..:... .||..|.||||| |.|.|....||||
Yeast   341 LKLDNCVMTSQGILKLIDFGSAVVFRYPFEDGVTMAHGIVGSDPYLAPEVITSTKSYDPQCVDIW 405

  Fly   211 SCGVILYALLCGTLPF------DDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRA 269
            |.|:|...::....|:      ||.     ||                   |.|   ..|.::..
Yeast   406 SIGIIYCCMVLKRFPWKAPRDSDDN-----FR-------------------LYC---MPDDIEHD 443

  Fly   270 NIEEIKKHEWFQKD 283
            .:|..:.||...|:
Yeast   444 YVESARHHEELLKE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 73/269 (27%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
HRK1NP_014910.1 Protein Kinases, catalytic domain 221..435 CDD:473864 66/243 (27%)
MSCRAMM_ClfA <469..620 CDD:468110
Protein Kinases, catalytic domain <677..721 CDD:473864
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.