DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and KIN4

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014876.1 Gene:KIN4 / 854408 SGDID:S000005759 Length:800 Species:Saccharomyces cerevisiae


Alignment Length:690 Identity:185/690 - (26%)
Similarity:279/690 - (40%) Gaps:197/690 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHYLLGATLGTGTFGKVKIG------EHQITRVKVAVKILNRQKI-KSLDVVGKIRREIQNLKLF 83
            |.|::|:|||.|.|||||:|      .:::.: :||:|::.|..| |..|...||.|||..||..
Yeast    44 GPYIIGSTLGEGEFGKVKLGWTKASSSNEVPK-QVAIKLIRRDTIKKDADKEIKIYREINALKHL 107

  Fly    84 RHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIV 148
            .||:||.|.:|:.....|.:::|:|||||.:.||.:..:|:|..|.|.|.|:||||:|.|...:|
Yeast   108 THPNIIYLEEVLQNSKYIGIVLEFVSGGEFYKYIQRKRRLKESSACRLFAQLISGVNYMHYKGLV 172

  Fly   149 HRDLKPENLLLDHNMHVKIADFGLSNMML-DGEFLRTSCGSPNYAAPE-VISGKLYAGPEVDIWS 211
            |||||.||||||.:.::.|.|||..|... |.|.::||||||.||||| |:|.|.|...:.|:||
Yeast   173 HRDLKLENLLLDKHENLVITDFGFVNEFFEDNELMKTSCGSPCYAAPELVVSTKAYEARKADVWS 237

  Fly   212 CGVILYALLCGTLPFDDEH-------VPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRA 269
            |||||||:|.|.||:||:|       :..|::.|.......|||:.....:|:.::|..:|.:|.
Yeast   238 CGVILYAMLAGYLPWDDDHENPTGDDIARLYKYITQTPLKFPEYITPIPRDLLRRILVPNPRRRI 302

  Fly   270 NIEEIKKHEW------------------FQKDLP-----------------AYLFPSSIEQDSNV 299
            |::.||:|.|                  .||:.|                 |..:..|.:::|.:
Yeast   303 NLQTIKRHVWLKPHEAFLSIQPNYWDEHLQKERPKPPNKGDVGRHSTYSSSASSYSKSRDRNSLI 367

  Fly   300 ID--------------------TYAVAEVC----TKFGVKETEVHNSLLS------------GDP 328
            |:                    |::.....    ||..:||:.::....|            |..
Yeast   368 IESTLEQHRMSPQLATSRPASPTFSTGSKVVLNDTKNDMKESNINGERTSASCRYTRDSKGNGQT 432

  Fly   329 HDQLAIAYHLIIDNK-----------------RFADDAANQINE-----------------INNF 359
            ..:...|.|....||                 |..:..::::.|                 |.|:
Yeast   433 QIEQVSARHSSRGNKHTSVAGLVTIPGSPTTARTRNAPSSKLTEHVKDSSQTSFTQEEFHRIGNY 497

  Fly   360 FVAGSPPPPPP--PPVPQSSMDHQAPLATVTVG--GGTSASSGTATPVP---------------- 404
            .|..|.|.|..  |.:.:::.|:.  ||.:.|.  |.....:....|||                
Yeast   498 HVPRSRPRPTSYYPGLSRNTADNS--LADIPVNKLGSNGRLTDAKDPVPLNAIHDTNKATISNNS 560

  Fly   405 --PVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPE-----------KTARGGTPIK 456
              .::.|..:.|.|:           |...|:.....|.....|           |.|..|.|  
Yeast   561 IMLLSEGPAAKTSPV-----------DYHYAIGDLNHGDKPITEVIDKINKDLTHKAAENGFP-- 612

  Fly   457 RAKWHLGIRSQSKPND-----IMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLY 516
                    |....|..     :..|...:......|.::.|..|    ..|.......|.|.::|
Yeast   613 --------RESIDPESTSTILVTKEPTNSTDEDHVESQLENVGH----SSNKSDASSDKDSKKIY 665

  Fly   517 QVDAKSYLLDFKSLTNDEVEQGDDVIMESLT----PPPLS 552
            :....|::..:.||      .|....:||.|    .||:|
Yeast   666 EKKRFSFMSLYSSL------NGSRSTVESRTSKGNAPPVS 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 119/287 (41%)
UBA_AID_AMPKalpha 297..360 CDD:270521 17/132 (13%)
AMPKA_C 457..580 CDD:213378 20/105 (19%)
KIN4NP_014876.1 STKc_Kin4 44..313 CDD:270978 118/269 (44%)

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