DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and KIN4

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014876.1 Gene:KIN4 / 854408 SGDID:S000005759 Length:800 Species:Saccharomyces cerevisiae


Alignment Length:690 Identity:185/690 - (26%)
Similarity:279/690 - (40%) Gaps:197/690 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GHYLLGATLGTGTFGKVKIG------EHQITRVKVAVKILNRQKI-KSLDVVGKIRREIQNLKLF 83
            |.|::|:|||.|.|||||:|      .:::.: :||:|::.|..| |..|...||.|||..||..
Yeast    44 GPYIIGSTLGEGEFGKVKLGWTKASSSNEVPK-QVAIKLIRRDTIKKDADKEIKIYREINALKHL 107

  Fly    84 RHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIV 148
            .||:||.|.:|:.....|.:::|:|||||.:.||.:..:|:|..|.|.|.|:||||:|.|...:|
Yeast   108 THPNIIYLEEVLQNSKYIGIVLEFVSGGEFYKYIQRKRRLKESSACRLFAQLISGVNYMHYKGLV 172

  Fly   149 HRDLKPENLLLDHNMHVKIADFGLSNMML-DGEFLRTSCGSPNYAAPE-VISGKLYAGPEVDIWS 211
            |||||.||||||.:.::.|.|||..|... |.|.::||||||.||||| |:|.|.|...:.|:||
Yeast   173 HRDLKLENLLLDKHENLVITDFGFVNEFFEDNELMKTSCGSPCYAAPELVVSTKAYEARKADVWS 237

  Fly   212 CGVILYALLCGTLPFDDEH-------VPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRA 269
            |||||||:|.|.||:||:|       :..|::.|.......|||:.....:|:.::|..:|.:|.
Yeast   238 CGVILYAMLAGYLPWDDDHENPTGDDIARLYKYITQTPLKFPEYITPIPRDLLRRILVPNPRRRI 302

  Fly   270 NIEEIKKHEW------------------FQKDLP-----------------AYLFPSSIEQDSNV 299
            |::.||:|.|                  .||:.|                 |..:..|.:::|.:
Yeast   303 NLQTIKRHVWLKPHEAFLSIQPNYWDEHLQKERPKPPNKGDVGRHSTYSSSASSYSKSRDRNSLI 367

  Fly   300 ID--------------------TYAVAEVC----TKFGVKETEVHNSLLS------------GDP 328
            |:                    |::.....    ||..:||:.::....|            |..
Yeast   368 IESTLEQHRMSPQLATSRPASPTFSTGSKVVLNDTKNDMKESNINGERTSASCRYTRDSKGNGQT 432

  Fly   329 HDQLAIAYHLIIDNK-----------------RFADDAANQINE-----------------INNF 359
            ..:...|.|....||                 |..:..::::.|                 |.|:
Yeast   433 QIEQVSARHSSRGNKHTSVAGLVTIPGSPTTARTRNAPSSKLTEHVKDSSQTSFTQEEFHRIGNY 497

  Fly   360 FVAGSPPPPPP--PPVPQSSMDHQAPLATVTVG--GGTSASSGTATPVP---------------- 404
            .|..|.|.|..  |.:.:::.|:.  ||.:.|.  |.....:....|||                
Yeast   498 HVPRSRPRPTSYYPGLSRNTADNS--LADIPVNKLGSNGRLTDAKDPVPLNAIHDTNKATISNNS 560

  Fly   405 --PVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPE-----------KTARGGTPIK 456
              .::.|..:.|.|:           |...|:.....|.....|           |.|..|.|  
Yeast   561 IMLLSEGPAAKTSPV-----------DYHYAIGDLNHGDKPITEVIDKINKDLTHKAAENGFP-- 612

  Fly   457 RAKWHLGIRSQSKPND-----IMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLY 516
                    |....|..     :..|...:......|.::.|..|    ..|.......|.|.::|
Yeast   613 --------RESIDPESTSTILVTKEPTNSTDEDHVESQLENVGH----SSNKSDASSDKDSKKIY 665

  Fly   517 QVDAKSYLLDFKSLTNDEVEQGDDVIMESLT----PPPLS 552
            :....|::..:.||      .|....:||.|    .||:|
Yeast   666 EKKRFSFMSLYSSL------NGSRSTVESRTSKGNAPPVS 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 119/287 (41%)
UBA_AID_AMPKalpha 297..360 CDD:270521 17/132 (13%)
AMPKA_C 457..580 CDD:213378 20/105 (19%)
KIN4NP_014876.1 STKc_Kin4 44..313 CDD:270978 118/269 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345341
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000976
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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