DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and PSK2

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014597.1 Gene:PSK2 / 854111 SGDID:S000005405 Length:1101 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:86/301 - (28%)
Similarity:148/301 - (49%) Gaps:40/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MRAAAAEAVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLD 68
            ::|.......|...:.:.:.|...:.:...:|.|.:|||.:..|......|.:|::.:::| .:|
Yeast   817 LKATYLTTPEANIGSQKRIKKFSDFTILQVMGEGAYGKVNLCIHNREHYIVVIKMIFKERI-LVD 880

  Fly    69 V------VGKIRREIQ---NLKLFRHPHIIKL--------YQVISTPSDIFMIMEYVSGG----E 112
            .      :|.|..|||   .|......:|:||        |..|.||         |.|.    :
Yeast   881 TWVRDRKLGTIPSEIQIMATLNKNSQENILKLLDFFEDDDYYYIETP---------VHGETGSID 936

  Fly   113 LFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMML 177
            |||.|.....:.||:|:..|:|:::.:.:.|...|||||:|.||:::|.:..||:.|||.:..:.
Yeast   937 LFDVIEFKKDMVEHEAKLVFKQVVASIKHLHDQGIVHRDIKDENVIVDSHGFVKLIDFGSAAYIK 1001

  Fly   178 DGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFRKIKS 240
            .|.| ....|:.:||||||:.|..|.|...|||:.||:||.::....|:  .||.:....|..||
Yeast  1002 SGPF-DVFVGTMDYAAPEVLGGSSYKGKPQDIWALGVLLYTIIYKENPYYNIDEILEGELRFDKS 1065

  Fly   241 GIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQ 281
                  |:::::.::|:.::|..:..||..|:||.:.:|.:
Yeast  1066 ------EHVSEECISLIKRILTREVDKRPTIDEIYEDKWLK 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 82/277 (30%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
PSK2NP_014597.1 STKc_PASK 840..1099 CDD:270906 82/275 (30%)
Blue background indicates that the domain is not in the aligned region.

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