DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and HSL1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_012821.2 Gene:HSL1 / 853760 SGDID:S000001584 Length:1518 Species:Saccharomyces cerevisiae


Alignment Length:694 Identity:176/694 - (25%)
Similarity:305/694 - (43%) Gaps:154/694 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQK------------ 63
            :||..|:..:....:|.:.||.|||.|:.|:|::.::..|....|:||:.::|            
Yeast    64 SVATKSSKRKSRDTVGPWKLGKTLGKGSSGRVRLAKNMETGQLAAIKIVPKKKAFVHCSNNGTVP 128

  Fly    64 -----------IKSLDVVGK------------IRREIQNLKLFRHPHIIKLYQVISTPSDIFMIM 105
                       :.|..:..:            |.|||..:||..|.:::.|::|....|::::::
Yeast   129 NSYSSSMVTSNVSSPSIASREHSNHSQTNPYGIEREIVIMKLISHTNVMALFEVWENKSELYLVL 193

  Fly   106 EYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLD-HNMHVKIAD 169
            |||.|||||||:|..|||.|.:|..:|:||:.||.|||...|.|||||||||||| .|..:||||
Yeast   194 EYVDGGELFDYLVSKGKLPEREAIHYFKQIVEGVSYCHSFNICHRDLKPENLLLDKKNRRIKIAD 258

  Fly   170 FGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 234
            ||::.:.|..:.|:||||||:||:||::.|:.|.|...|:||||::|:|||.|.|||:|:::..|
Yeast   259 FGMAALELPNKLLKTSCGSPHYASPEIVMGRPYHGGPSDVWSCGIVLFALLTGHLPFNDDNIKKL 323

  Fly   235 FRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK--DLPAYLFPSSIEQDS 297
            ..|::||.:.:|..|:.:..:|:.::|.:||.||...:||.||...:|  |||.......:.:|:
Yeast   324 LLKVQSGKYQMPSNLSSEARDLISKILVIDPEKRITTQEILKHPLIKKYDDLPVNKVLRKMRKDN 388

  Fly   298 ------------------NVIDTYAVAEVCTKF---------GVKETEVHNSLLSGDPHDQLAIA 335
                              :::..::..|:....         ||....:...||. .|..:..:.
Yeast   389 MARGKSNSDLHLLNNVSPSIVTLHSKGEIDESILRSLQILWHGVSRELITAKLLQ-KPMSEEKLF 452

  Fly   336 YHLII--------------DNKR-------------FADDAAN------QINEI----------- 356
            |.|::              :||:             :|...||      :.|::           
Yeast   453 YSLLLQYKQRHSISLSSSSENKKSATESSVNEPRIEYASKTANNTGLRSENNDVKTLHSLEIHSE 517

  Fly   357 ------NNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTAT--PVPPVAGGTPS- 412
                  .|..:.|.......|.:.|.|   |..:.|::......|.:...|  |..|:...:.| 
Yeast   518 DTSTVNQNNAITGVNTEINAPVLAQKS---QFSINTLSQPESDKAEAEAVTLPPAIPIFNASSSR 579

  Fly   413 ----STIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPNDI 473
                |...|.....|...:.:.:|::|..||.......:......|...:::.|..|:       
Yeast   580 IFRNSYTSISSRSRRSLRLSNSRLSLSASTSRETVHDNEMPLPQLPKSPSRYSLSRRA------- 637

  Fly   474 MLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQG 538
             :....:.|::          |..:.|:|:.....::.:||  ...:|..|...:|::...:...
Yeast   638 -IHASPSTKSI----------HKSLSRKNIAATVAARRTLQ--NSASKRSLYSLQSISKRSLNLN 689

  Fly   539 DDVIMESLTPPPLSVS-GVMPLQPTGHHTME----FFEMCAALI 577
            |.::.:...|.....| .|...:|   |::|    |..:|..::
Yeast   690 DLLVFDDPLPSKKPASENVNKSEP---HSLESDSDFEILCDQIL 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 114/290 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521 15/139 (11%)
AMPKA_C 457..580 CDD:213378 20/126 (16%)
HSL1NP_012821.2 STKc_BRSK1_2 79..369 CDD:270983 114/289 (39%)
AMPKA_C_like 1347..1517 CDD:418410
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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