DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and HSL1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_012821.2 Gene:HSL1 / 853760 SGDID:S000001584 Length:1518 Species:Saccharomyces cerevisiae


Alignment Length:694 Identity:176/694 - (25%)
Similarity:305/694 - (43%) Gaps:154/694 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQK------------ 63
            :||..|:..:....:|.:.||.|||.|:.|:|::.::..|....|:||:.::|            
Yeast    64 SVATKSSKRKSRDTVGPWKLGKTLGKGSSGRVRLAKNMETGQLAAIKIVPKKKAFVHCSNNGTVP 128

  Fly    64 -----------IKSLDVVGK------------IRREIQNLKLFRHPHIIKLYQVISTPSDIFMIM 105
                       :.|..:..:            |.|||..:||..|.:::.|::|....|::::::
Yeast   129 NSYSSSMVTSNVSSPSIASREHSNHSQTNPYGIEREIVIMKLISHTNVMALFEVWENKSELYLVL 193

  Fly   106 EYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLD-HNMHVKIAD 169
            |||.|||||||:|..|||.|.:|..:|:||:.||.|||...|.|||||||||||| .|..:||||
Yeast   194 EYVDGGELFDYLVSKGKLPEREAIHYFKQIVEGVSYCHSFNICHRDLKPENLLLDKKNRRIKIAD 258

  Fly   170 FGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 234
            ||::.:.|..:.|:||||||:||:||::.|:.|.|...|:||||::|:|||.|.|||:|:::..|
Yeast   259 FGMAALELPNKLLKTSCGSPHYASPEIVMGRPYHGGPSDVWSCGIVLFALLTGHLPFNDDNIKKL 323

  Fly   235 FRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK--DLPAYLFPSSIEQDS 297
            ..|::||.:.:|..|:.:..:|:.::|.:||.||...:||.||...:|  |||.......:.:|:
Yeast   324 LLKVQSGKYQMPSNLSSEARDLISKILVIDPEKRITTQEILKHPLIKKYDDLPVNKVLRKMRKDN 388

  Fly   298 ------------------NVIDTYAVAEVCTKF---------GVKETEVHNSLLSGDPHDQLAIA 335
                              :::..::..|:....         ||....:...||. .|..:..:.
Yeast   389 MARGKSNSDLHLLNNVSPSIVTLHSKGEIDESILRSLQILWHGVSRELITAKLLQ-KPMSEEKLF 452

  Fly   336 YHLII--------------DNKR-------------FADDAAN------QINEI----------- 356
            |.|::              :||:             :|...||      :.|::           
Yeast   453 YSLLLQYKQRHSISLSSSSENKKSATESSVNEPRIEYASKTANNTGLRSENNDVKTLHSLEIHSE 517

  Fly   357 ------NNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTAT--PVPPVAGGTPS- 412
                  .|..:.|.......|.:.|.|   |..:.|::......|.:...|  |..|:...:.| 
Yeast   518 DTSTVNQNNAITGVNTEINAPVLAQKS---QFSINTLSQPESDKAEAEAVTLPPAIPIFNASSSR 579

  Fly   413 ----STIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPNDI 473
                |...|.....|...:.:.:|::|..||.......:......|...:::.|..|:       
Yeast   580 IFRNSYTSISSRSRRSLRLSNSRLSLSASTSRETVHDNEMPLPQLPKSPSRYSLSRRA------- 637

  Fly   474 MLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTNDEVEQG 538
             :....:.|::          |..:.|:|:.....::.:||  ...:|..|...:|::...:...
Yeast   638 -IHASPSTKSI----------HKSLSRKNIAATVAARRTLQ--NSASKRSLYSLQSISKRSLNLN 689

  Fly   539 DDVIMESLTPPPLSVS-GVMPLQPTGHHTME----FFEMCAALI 577
            |.::.:...|.....| .|...:|   |::|    |..:|..::
Yeast   690 DLLVFDDPLPSKKPASENVNKSEP---HSLESDSDFEILCDQIL 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 114/290 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521 15/139 (11%)
AMPKA_C 457..580 CDD:213378 20/126 (16%)
HSL1NP_012821.2 STKc_BRSK1_2 79..369 CDD:270983 114/289 (39%)
AMPKA_C_like 1347..1517 CDD:473060
Blue background indicates that the domain is not in the aligned region.

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