DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and PTK1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_012723.3 Gene:PTK1 / 853635 SGDID:S000001681 Length:662 Species:Saccharomyces cerevisiae


Alignment Length:434 Identity:110/434 - (25%)
Similarity:160/434 - (36%) Gaps:139/434 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 KLFRHPHIIKLYQVISTPSDIF------MIMEYVSGGELFDYIVKHGKLQEHQARRF--FQQIIS 137
            :|..|.||...:.::..|:.::      .:|| :...:||..|.|.|......|.:|  |:|:..
Yeast   252 QLSHHVHITNTFLLVKVPTTVYTTRGWGFVME-LGLRDLFAMIQKSGWRSVALAEKFCIFKQVAC 315

  Fly   138 GVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMM-LDGEFLRT---SC----GSPNYAAP 194
            ||.:||...|.||||||||:||..:...|:.|||:|:.. .|...|.:   .|    |||.||.|
Yeast   316 GVKFCHDQGIAHRDLKPENVLLSPDGVCKLTDFGISDWYHTDPHDLSSPVKKCAGMIGSPPYAPP 380

  Fly   195 EVI--SGKLYAGPE---------VDIWSCGVILYALLCGTLPF-DDEHVPTLFR----------- 236
            ||:  ..|.:...|         :|.:..|:||..|:...:|| :.....|.||           
Yeast   381 EVMFYDSKKHYDTELQQPYDPRALDCYGLGIILMTLVNNVIPFLESCSFDTGFRDYCDAYENFIR 445

  Fly   237 ------KIKSGIFPIP--------EYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAY 287
                  :.:....|.|        .:.|.....:..::...:...|..|:::.:..|||      
Yeast   446 LHDRAFRNRGNYRPGPGMEYHLARNFKNGHASRVAWRLADPEAATRYTIDDLFEDPWFQ------ 504

  Fly   288 LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQ 352
                .||...:..|.|    ||.|..:|.|...|      |.     .:|:       |.|.|..
Yeast   505 ----GIETCVDANDKY----VCKKPIIKTTTYEN------PR-----GFHI-------ATDVAAT 543

  Fly   353 INEINNFF----------------------VAGSPPPPPP--------------PPVPQSSMDHQ 381
            ....|.|.                      :|.|||||||              .|.||      
Yeast   544 TPTSNPFLKNRVPIRSMVDIAAHPSPTATVLASSPPPPPPATHVPAEALFTLRETPPPQ------ 602

  Fly   382 APLATVTVGGGTSASSGTATPVPPVAGGTPSSTIPIRPH-PERI 424
              |||:|:     :....|||.|. |...||:.  :|.| |.|:
Yeast   603 --LATLTL-----SEEPPATPAPS-APSAPSAR--VRGHSPHRV 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 64/251 (25%)
UBA_AID_AMPKalpha 297..360 CDD:270521 14/62 (23%)
AMPKA_C 457..580 CDD:213378
PTK1NP_012723.3 PKc_like 202..503 CDD:419665 64/251 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.