DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and PTK2

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_012593.3 Gene:PTK2 / 853522 SGDID:S000003820 Length:818 Species:Saccharomyces cerevisiae


Alignment Length:540 Identity:116/540 - (21%)
Similarity:205/540 - (37%) Gaps:131/540 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVV---------GKIRREIQNLKLFRH-PHI 88
            :|:|       |..::.:||.:.:..:...:|.|:::         .:..:|....|...| .||
Yeast   261 IGSG-------GSSEVRKVKSSYRQKDVYALKKLNMIYHESPEKFYKRCSKEFIIAKHLSHNVHI 318

  Fly    89 IKLYQVISTPSDIF------MIMEYVSGGELFDYIVKHG--KLQEHQARRFFQQIISGVDYCHRH 145
            ...:.::..|:..:      .||| :...:||..:.:.|  .:..::....|:|:..|:.:||.:
Yeast   319 TNTFYLLKVPTTTYTTRGWGFIME-LGVKDLFQLMERTGWKNVPFNEKYCLFKQVAQGIKFCHDN 382

  Fly   146 MIVHRDLKPENLLLDHNMHVKIADFGLSNM--MLDGEFLR--TSC----GSPNYAAPEVI---SG 199
            .|.||||||||:|:......|:.|||:|:.  ::..::..  .:|    |||.|..|||:   :.
Yeast   383 GIAHRDLKPENVLISKEGICKLTDFGISDWYHVIPHDYTSPVKTCQGMIGSPPYTPPEVMYFDAK 447

  Fly   200 KLYAGPE----------VDIWSCGVILYALLCGTLPFDDE-HVPTLFRKI--------------- 238
            |.|  ||          :|.::.|::|..::...:||.|. :....||:.               
Yeast   448 KHY--PEKFQKPYNPLAMDSYALGIMLITMINNIIPFIDSCNTDARFREFEVSYDNFINHQNPHF 510

  Fly   239 ------KSGIFPIPEY------LNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK--------- 282
                  |.|  |..||      .|.....:..::...:|..|..::::....:||:         
Yeast   511 RDKGCHKPG--PGSEYSLARNFKNTDATRIAWRLADPNPATRYTMDDLFNDPFFQQIETCVEPND 573

  Fly   283 -DLPAY--LFPSSIEQD--SNVIDT---YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLI 339
             ||...  |..|:...|  .|.:|.   ..|......|..|||      |:..|...|.||....
Yeast   574 DDLVRVPELRKSTSTNDFSENSLDAPHDQEVIHTSNPFLKKET------LTSKPRSMLEIAESPS 632

  Fly   340 IDNK-RFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTS---ASSGTA 400
            :..| :..|.|..:.:::.:  ..|:....|      ...|.:..|....|..|..   ....|.
Yeast   633 LKQKSKVKDSAKTKTHDVGD--EGGNESTKP------KQQDKKENLKKDEVKNGDKDKVIEEATT 689

  Fly   401 TPVPPV-AGGTPSSTIPIRPHPERIAPMRD-RQLAMSVQT----SGGGAFPEKTARGGTPIKRAK 459
            |.|..: ...||:||.......|..:.|:: :.:..|..|    :|....|   |:.||.:.:..
Yeast   690 TNVDSILEKPTPTSTKVEDNLSEDDSTMKELKSMLNSTPTTPTHNGPTPLP---AKAGTQLDKRM 751

  Fly   460 WHLGIRSQ--------SKPN 471
            ..|.::|:        |.||
Yeast   752 SDLSLKSETPASTKNFSAPN 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 67/312 (21%)
UBA_AID_AMPKalpha 297..360 CDD:270521 15/66 (23%)
AMPKA_C 457..580 CDD:213378 5/23 (22%)
PTK2NP_012593.3 S_TKc 259..562 CDD:214567 67/312 (21%)
STKc_HAL4_like 261..562 CDD:270896 67/312 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345283
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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