DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and KIN2

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_013197.1 Gene:KIN2 / 850785 SGDID:S000004086 Length:1147 Species:Saccharomyces cerevisiae


Alignment Length:724 Identity:183/724 - (25%)
Similarity:297/724 - (41%) Gaps:220/724 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNR----------------------QKIKSL 67
            :|.:....|:|.|:.||||:.:|:.|:....:||:||                      ::.|.|
Yeast    96 LGDWEFLETVGAGSMGKVKLVKHRQTKEICVIKIVNRASKAYLHKQHSLPSPKNESEILERQKRL 160

  Fly    68 D-VVGKIRREIQNLKL---FRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQA 128
            : .:.:.:|.::...|   ..||||.:|:::.:..:..:|:.||||||:|.|||::||.|:||.|
Yeast   161 EKEIARDKRTVREASLGQILYHPHICRLFEMCTMSNHFYMLFEYVSGGQLLDYIIQHGSLKEHHA 225

  Fly   129 RRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAA 193
            |:|.:.|.|.:.|.|.:.|||||||.||:::..:..:||.||||||:....:.|.|.|||..:||
Yeast   226 RKFARGIASALQYLHANNIVHRDLKIENIMISSSGEIKIIDFGLSNIFDYRKQLHTFCGSLYFAA 290

  Fly   194 PEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVC 258
            ||::..:.|.||||||||.|::||.|:||.:|||||:...|..|||.|....|.:|:.:|::|:.
Yeast   291 PELLKAQPYTGPEVDIWSFGIVLYVLVCGKVPFDDENSSILHEKIKKGKVDYPSHLSIEVISLLT 355

  Fly   259 QMLQVDPLKRANIEEIKKHEWFQK----DLPAYLFPSSIEQDSNVIDTYAVAE------------ 307
            :|:.||||:||.::.:.:|.|..:    ..|:|: |:.:.....:||:..:.|            
Yeast   356 RMIVVDPLRRATLKNVVEHPWMNRGYDFKAPSYV-PNRVPLTPEMIDSQVLKEMYRLEFIDDIED 419

  Fly   308 --------VCTKFGV-----------------------------KETEVHNSLLSG--------- 326
                    |..|..:                             ::|.:.|.:.|.         
Yeast   420 TRRSLIRLVTEKEYIQLSQEYWDKLSNAKGLSSSLNNNYLNSTAQQTLIQNHITSNPSQSGYNEP 484

  Fly   327 -----DP----HDQLAIAYHLIID-----------NKRFADDAANQINE------------INNF 359
                 ||    |..|:| |||:.:           .:..|..|..|..:            :|| 
Yeast   485 DSNFEDPTLAYHPLLSI-YHLVSEMVARKLAKLQRRQALALQAQAQQRQQQQQVALGTKVALNN- 547

  Fly   360 FVAGSPP------PPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPVPPVAGGTPSSTIPIR 418
               .||.      .|....||...:.....:.|    .|||.::.|:...|......|..|||.:
Yeast   548 ---NSPDIMTKMRSPQKEVVPNPGIFQVPAIGT----SGTSNNTNTSNKPPLHVMVPPKLTIPEQ 605

  Fly   419 PHPERIAPMRDRQLAMSVQTSG---------GGAFPEKTARGGTPIKRAKWHLG----------- 463
            .|   .:|...:...:..:.:|         .|.:.:::|.......:.|..:|           
Yeast   606 AH---TSPTSRKSSDIHTELNGVLKSTPVPVSGEYQQRSASPVVGEHQEKNTIGGIFRRISQSGQ 667

  Fly   464 ----IRSQ------------SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMS 512
                .|.|            ||.|:|.::|.::..      :.|:.|....||.    ..:...|
Yeast   668 SQHPTRQQEPLPEREPPTYMSKSNEISIKVPKSHS------RTISDYIPSARRY----PSYVPNS 722

  Fly   513 LQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLSVS----GVMPLQPTGHHTMEFFEMC 573
            :.:.|..||:                     .::.||..|||    ..:|..|..          
Yeast   723 VDVKQKPAKN---------------------TTIAPPIRSVSQKQNSDLPALPQN---------- 756

  Fly   574 AALIIQLAR 582
            |.||:|..|
Yeast   757 AELIVQKQR 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 109/280 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521 21/152 (14%)
AMPKA_C 457..580 CDD:213378 27/153 (18%)
KIN2NP_013197.1 STKc_Kin1_2 97..377 CDD:270979 109/279 (39%)
KA1 1104..1147 CDD:396635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345336
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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