DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK17

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_175260.1 Gene:CIPK17 / 841246 AraportID:AT1G48260 Length:432 Species:Arabidopsis thaliana


Alignment Length:342 Identity:142/342 - (41%)
Similarity:200/342 - (58%) Gaps:27/342 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPH 87
            :::|.|.||.|||.|...|||.....:|....|:||:.:..|..|:|..:|:|||:.||:.:||:
plant     6 MRVGKYELGRTLGEGNSAKVKFAIDTLTGESFAIKIIEKSCITRLNVSFQIKREIRTLKVLKHPN 70

  Fly    88 IIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDL 152
            |::|::|:::.:.|:|::|.|:||:|||.||..|||.|.|.|:.|||:|.||.|||...:.||||
plant    71 IVRLHEVLASKTKIYMVLECVTGGDLFDRIVSKGKLSETQGRKMFQQLIDGVSYCHNKGVFHRDL 135

  Fly   153 KPENLLLDHNMHVKIADFGLSNMML----DGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCG 213
            |.||:|||...|:||.|||||.:..    || .|.|:||||||.||||::.:.|.|...||||||
plant   136 KLENVLLDAKGHIKITDFGLSALSQHYREDG-LLHTTCGSPNYVAPEVLANEGYDGAASDIWSCG 199

  Fly   214 VILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHE 278
            ||||.:|.|.|||||.::..:.|||..|..|||.:::.....::.:||..:|:.|..|..||.|:
plant   200 VILYVILTGCLPFDDANLAVICRKIFKGDPPIPRWISLGAKTMIKRMLDPNPVTRVTIAGIKAHD 264

  Fly   279 WFQKDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNK 343
            ||:.|..    ||:.:.|.   |.|.:.|  ..|.:||.|...|     |.....|....:|...
plant   265 WFKHDYT----PSNYDDDD---DVYLIQE--DVFMMKEYEEEKS-----PDSPTIINAFQLIGMS 315

  Fly   344 RFADDAANQINEINNFF 360
            .|.|        ::.||
plant   316 SFLD--------LSGFF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 121/258 (47%)
UBA_AID_AMPKalpha 297..360 CDD:270521 13/62 (21%)
AMPKA_C 457..580 CDD:213378
CIPK17NP_175260.1 Protein Kinases, catalytic domain 10..265 CDD:473864 120/255 (47%)
CIPK_C 307..418 CDD:213380 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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