DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK9

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_849571.1 Gene:CIPK9 / 839349 AraportID:AT1G01140 Length:451 Species:Arabidopsis thaliana


Alignment Length:562 Identity:156/562 - (27%)
Similarity:266/562 - (47%) Gaps:164/562 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHI 88
            ::|:|.:|.|||.|:|.|||..::.:|..:.|:|||:|:|:....:|.:::|||..:||.:||::
plant    15 RVGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQLKREISTMKLIKHPNV 79

  Fly    89 IKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLK 153
            :::.:|:::.:.|::::|.|:||||||.|.:.|:|:|.:|||:|||:|:.|||||...:.|||||
plant    80 VEIIEVMASKTKIYIVLELVNGGELFDKIAQQGRLKEDEARRYFQQLINAVDYCHSRGVYHRDLK 144

  Fly   154 PENLLLDHNMHVKIADFGLS----NMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGV 214
            ||||:||.|..:|::|||||    .:..|| .|.|:||:|||.||||:|.|.|.|...|:|||||
plant   145 PENLILDANGVLKVSDFGLSAFSRQVREDG-LLHTACGTPNYVAPEVLSDKGYDGAAADVWSCGV 208

  Fly   215 ILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEW 279
            ||:.|:.|.||||:.::.||:::|....|..|.:.::....::.::|:.:|:.|.:|.|:.:.||
plant   209 ILFVLMAGYLPFDEPNLMTLYKRICKAEFSCPPWFSQGAKRVIKRILEPNPITRISIAELLEDEW 273

  Fly   280 FQKDLPAYLFPSSIEQDSN--VID----TYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHL 338
            |:|...    |.|.:||..  .||    .::.::.|.....||..|..:            |:.|
plant   274 FKKGYK----PPSFDQDDEDITIDDVDAAFSNSKECLVTEKKEKPVSMN------------AFEL 322

  Fly   339 IIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTSASSGTATPV 403
            |..:..|:         :.|.|                  :.||.|.                  
plant   323 ISSSSEFS---------LENLF------------------EKQAQLV------------------ 342

  Fly   404 PPVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQS 468
                                                      :|..|             ..||.
plant   343 ------------------------------------------KKETR-------------FTSQR 352

  Fly   469 KPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSL--QLYQVDAKSYLLDFKSLT 531
            ..::||.::....|.|.:.   :...:.:::.:..|:|:..::|:  ::::|             
plant   353 SASEIMSKMEETAKPLGFN---VRKDNYKIKMKGDKSGRKGQLSVATEVFEV------------- 401

  Fly   532 NDEVEQGDDVIMESLTPPPLSVSGVMPLQPTGHHTMEFFEMC 573
                            .|.|.   |:.|:.||..|:||.::|
plant   402 ----------------APSLH---VVELRKTGGDTLEFHKVC 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 112/258 (43%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/68 (16%)
AMPKA_C 457..580 CDD:213378 20/119 (17%)
CIPK9NP_849571.1 STKc_SnRK3 19..273 CDD:271133 110/254 (43%)
CIPK_C 318..437 CDD:213380 31/254 (12%)

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