DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and SIP1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_568878.1 Gene:SIP1 / 835951 AraportID:AT5G58380 Length:479 Species:Arabidopsis thaliana


Alignment Length:269 Identity:116/269 - (43%)
Similarity:178/269 - (66%) Gaps:6/269 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFR 84
            :|.|....|.:|..||.|||.||..|...:|...||:|:::::|:..:.::.:|:|||..:::.|
plant     4 KPSVLTDKYDVGRLLGQGTFAKVYYGRSILTNQSVAIKMIDKEKVMKVGLIEQIKREISVMRIAR 68

  Fly    85 HPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVH 149
            ||::::||:|::|.:.|:.:|||..|||||:.:.| |||::..|.::|.|:|:.||:||...:.|
plant    69 HPNVVELYEVMATKTRIYFVMEYCKGGELFNKVAK-GKLRDDVAWKYFYQLINAVDFCHSREVYH 132

  Fly   150 RDLKPENLLLDHNMHVKIADFGLSNM----MLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIW 210
            ||:||||||||.|.::|::|||||.:    ..|| .|.|:||:|.|.|||||:.|.|.|.:.|||
plant   133 RDIKPENLLLDDNENLKVSDFGLSALADCKRQDG-LLHTTCGTPAYVAPEVINRKGYDGTKADIW 196

  Fly   211 SCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIK 275
            ||||:|:.||.|.|||.|.::..::|||....|..|.:...:|..|:|:||..:|..|..|..|:
plant   197 SCGVVLFVLLAGYLPFHDSNLMEMYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPETRITIARIR 261

  Fly   276 KHEWFQKDL 284
            :..||:|.|
plant   262 ESSWFRKGL 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 110/258 (43%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
SIP1NP_568878.1 Protein Kinases, catalytic domain 11..265 CDD:473864 110/255 (43%)
CIPK_C 328..440 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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