DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK19

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_199393.1 Gene:CIPK19 / 834621 AraportID:AT5G45810 Length:483 Species:Arabidopsis thaliana


Alignment Length:406 Identity:147/406 - (36%)
Similarity:222/406 - (54%) Gaps:60/406 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLK 81
            :|.|.|: :|.|.:|..||.|||.||.:..:..:...||:|:::::|:....::..|:|||..|:
plant    18 SNHQALI-LGKYEMGRLLGHGTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILR 81

  Fly    82 LFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHM 146
            ..|||:|::|::|::|.|.|:.:||||.|||||:.:.| |:|:|..||::|||:||.|.:||...
plant    82 RVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAK-GRLKEEMARKYFQQLISAVSFCHFRG 145

  Fly   147 IVHRDLKPENLLLDHNMHVKIADFGLS----NMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEV 207
            :.||||||||||||.|.::|::|||||    .:..||.| .|.||:|.|.||||::.|.|.|.:|
plant   146 VYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLF-HTFCGTPAYVAPEVLARKGYDGAKV 209

  Fly   208 DIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIE 272
            |||||||||:.|:.|.|||.|.:|..:::||..|.|..|.:...::..|:.:||:..|.:|..:.
plant   210 DIWSCGVILFVLMAGFLPFHDRNVMAMYKKIYRGDFRCPRWFPVEINRLLIRMLETKPERRFTMP 274

  Fly   273 EIKKHEWFQKDLPAYLFPSSIEQD---SNVIDTYAVAEVCTKFG----VKETEVHNS-------- 322
            :|.:..||:|......|  .:|.|   .||.|...:..:.:..|    |.|.|...|        
plant   275 DIMETSWFKKGFKHIKF--YVEDDHQLCNVADDDEIESIESVSGRSSTVSEPEDFESFDGRRRGG 337

  Fly   323 ------------LLSGDPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQ 375
                        |:|..|...|         :..|.||..      .:.||:|:       ||.|
plant   338 SMPRPASLNAFDLISFSPGFDL---------SGLFEDDGE------GSRFVSGA-------PVGQ 380

  Fly   376 --SSMDHQAPLATVTV 389
              |.::..|.:.:.||
plant   381 IISKLEEIARIVSFTV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 113/258 (44%)
UBA_AID_AMPKalpha 297..360 CDD:270521 15/86 (17%)
AMPKA_C 457..580 CDD:213378
CIPK19NP_199393.1 STKc_SnRK3 27..281 CDD:271133 112/255 (44%)
CIPK_C 346..458 CDD:213380 17/73 (23%)
Blue background indicates that the domain is not in the aligned region.

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