DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK12

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_193605.1 Gene:CIPK12 / 827604 AraportID:AT4G18700 Length:489 Species:Arabidopsis thaliana


Alignment Length:426 Identity:149/426 - (34%)
Similarity:229/426 - (53%) Gaps:47/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFR 84
            |.|: :|.|.:|..||.|||.||.:..:..|...||:|:::::|:....::..|:|||..|:..|
plant    19 QALI-LGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIKREISILRRVR 82

  Fly    85 HPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVH 149
            ||:|::|::|::|.:.|:.:||||.|||||:.:.| |:|:|..||::|||:||.|.:||...:.|
plant    83 HPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAK-GRLKEEVARKYFQQLISAVTFCHARGVYH 146

  Fly   150 RDLKPENLLLDHNMHVKIADFGLS----NMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIW 210
            |||||||||||.|.::|::|||||    .:..||.| .|.||:|.|.||||::.|.|...:||||
plant   147 RDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLF-HTFCGTPAYVAPEVLARKGYDAAKVDIW 210

  Fly   211 SCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIK 275
            ||||||:.|:.|.|||.|.:|..:::||..|.|..|.:.:.::..|:.::|:.:|.||....||.
plant   211 SCGVILFVLMAGYLPFHDRNVMAMYKKIYRGEFRCPRWFSTELTRLLSKLLETNPEKRFTFPEIM 275

  Fly   276 KHEWFQKDLPAYLFPSSIEQDS--NVIDTYAV----AEVCTKFGVKETEVH----NSLLSGDPHD 330
            ::.||:|......|  .:|.|.  ||:|...:    .|........|:|:.    ...:.|.|..
plant   276 ENSWFKKGFKHIKF--YVEDDKLCNVVDDDELESDSVESDRDSAASESEIEYLEPRRRVGGLPRP 338

  Fly   331 QLAIAYHLI-----IDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQ--SSMDHQAPLATVT 388
            ....|:.:|     .|.....||...     .:.||:|:       ||.:  |.::..|.:.:.|
plant   339 ASLNAFDIISFSQGFDLSGLFDDDGE-----GSRFVSGA-------PVSKIISKLEEIAKVVSFT 391

  Fly   389 V---------GGGTSASSGTATPVPPVAGGTPSSTI 415
            |         .|......|..|....:...|||..:
plant   392 VRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 113/258 (44%)
UBA_AID_AMPKalpha 297..360 CDD:270521 13/77 (17%)
AMPKA_C 457..580 CDD:213378
CIPK12NP_193605.1 STKc_SnRK3 25..279 CDD:271133 112/255 (44%)
CIPK_C 342..453 CDD:213380 20/98 (20%)
Blue background indicates that the domain is not in the aligned region.

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