DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK4

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_193194.1 Gene:CIPK4 / 827106 AraportID:AT4G14580 Length:426 Species:Arabidopsis thaliana


Alignment Length:310 Identity:119/310 - (38%)
Similarity:190/310 - (61%) Gaps:19/310 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNL-KLFRHP 86
            |.:|.|.||..||:|:|.||.:.....|...||:||:::||.....:..:|.|||:.: :|..||
plant    16 VLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEPRIIREIEAMRRLHNHP 80

  Fly    87 HIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRD 151
            :::|:::|::|.|.|::::||.:|||||..:::.|:|.|..|||:|||:.|.:.:|||..|.|||
plant    81 NVLKIHEVMATKSKIYLVVEYAAGGELFTKLIRFGRLNESAARRYFQQLASALSFCHRDGIAHRD 145

  Fly   152 LKPENLLLDHNMHVKIADFGLSNM---MLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCG 213
            :||:|||||...::|::|||||.:   ..:...|.|:||:|.|.|||||:.:.|.|.:.|.||||
plant   146 VKPQNLLLDKQGNLKVSDFGLSALPEHRSNNGLLHTACGTPAYTAPEVIAQRGYDGAKADAWSCG 210

  Fly   214 VILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHE 278
            |.|:.||.|.:||||.::..::|||....:..|.:::|...:::.::|..:|..|.:||.:....
plant   211 VFLFVLLAGYVPFDDANIVAMYRKIHKRDYRFPSWISKPARSIIYKLLDPNPETRMSIEAVMGTV 275

  Fly   279 WFQKDLPAYLFPSSI-EQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGD 327
            ||||.|....|.||: |.|              :|..||.:..|::.:.|
plant   276 WFQKSLEISEFQSSVFELD--------------RFLEKEAKSSNAITAFD 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 103/258 (40%)
UBA_AID_AMPKalpha 297..360 CDD:270521 5/31 (16%)
AMPKA_C 457..580 CDD:213378
CIPK4NP_193194.1 Protein Kinases, catalytic domain 20..276 CDD:473864 102/255 (40%)
CIPK_C 308..>376 CDD:213380 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

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