DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK7

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_188940.1 Gene:CIPK7 / 821874 AraportID:AT3G23000 Length:429 Species:Arabidopsis thaliana


Alignment Length:306 Identity:121/306 - (39%)
Similarity:189/306 - (61%) Gaps:16/306 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQMRAAAAEAVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKS 66
            ||.:::.|...|.        :.:|.|.||..||:|:|.||.:.....:...|||||:.::|...
plant     7 PQNQSSPATTPAK--------ILLGKYELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTIE 63

  Fly    67 LDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARR 130
            ..:..:|.|||..::..| ||:|:|:::|::|.|.|:::||..||||||..:::.|:|.|..|||
plant    64 SGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRRGRLPESTARR 128

  Fly   131 FFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNM--MLDGEFLRTSCGSPNYAA 193
            :|||:.|.:.:.|:..:.|||:||:|||||...::|::|||||.:  .|....|.|:||:|.|.|
plant   129 YFQQLASALRFSHQDGVAHRDVKPQNLLLDEQGNLKVSDFGLSALPEHLQNGLLHTACGTPAYTA 193

  Fly   194 PEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVC 258
            |||||.:.|.|.:.|.|||||||:.||.|.:||||.::..::|||....:..|.:::||..:::.
plant   194 PEVISRRGYDGAKADAWSCGVILFVLLVGDVPFDDSNIAAMYRKIHRRDYRFPSWISKQAKSIIY 258

  Fly   259 QMLQVDPLKRANIEEIKKHEWFQKDLPA-----YLFPSSIEQDSNV 299
            |||..:|:.|.:||.:.|..||:|.|..     .:|.|.:|..|:|
plant   259 QMLDPNPVTRMSIETVMKTNWFKKSLETSEFHRNVFDSEVEMKSSV 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 108/257 (42%)
UBA_AID_AMPKalpha 297..360 CDD:270521 2/3 (67%)
AMPKA_C 457..580 CDD:213378
CIPK7NP_188940.1 Protein Kinases, catalytic domain 24..279 CDD:473864 107/254 (42%)
CIPK_C 308..>385 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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