DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and CIPK1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_566580.1 Gene:CIPK1 / 821016 AraportID:AT3G17510 Length:444 Species:Arabidopsis thaliana


Alignment Length:298 Identity:130/298 - (43%)
Similarity:192/298 - (64%) Gaps:10/298 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPH 87
            :::|.|.||.|||.|.|||||..:..::....||||:::.:|..|:...:|:|||:.||:.:|||
plant    15 MRLGKYELGRTLGEGNFGKVKFAKDTVSGHSFAVKIIDKSRIADLNFSLQIKREIRTLKMLKHPH 79

  Fly    88 IIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDL 152
            |::|::|:::.:.|.|:||.|:||||||.||.:|||.|...|:.|||:|.|:.|||...:.||||
plant    80 IVRLHEVLASKTKINMVMELVTGGELFDRIVSNGKLTETDGRKMFQQLIDGISYCHSKGVFHRDL 144

  Fly   153 KPENLLLDHNMHVKIADFGLSNM---MLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGV 214
            |.||:|||...|:||.|||||.:   ..|...|.|:||||||.||||::.:.|.|...|||||||
plant   145 KLENVLLDAKGHIKITDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAASDIWSCGV 209

  Fly   215 ILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEW 279
            |||.:|.|.|||||.::..|::||..|..|||.:|:.....::.:||..:|:.|..:..||..||
plant   210 ILYVILTGCLPFDDRNLAVLYQKICKGDPPIPRWLSPGARTMIKRMLDPNPVTRITVVGIKASEW 274

  Fly   280 FQKDLPAYLFPSSIEQDSNVIDT----YAVAEVCTKFG 313
            |:.:   |:.....:.|...:||    :::.|:.::.|
plant   275 FKLE---YIPSIPDDDDEEEVDTDDDAFSIQELGSEEG 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 122/257 (47%)
UBA_AID_AMPKalpha 297..360 CDD:270521 4/21 (19%)
AMPKA_C 457..580 CDD:213378
CIPK1NP_566580.1 STKc_SnRK3 19..274 CDD:271133 120/254 (47%)
CIPK_C 319..432 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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