DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and SNRK2.9

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_179885.1 Gene:SNRK2.9 / 816833 AraportID:AT2G23030 Length:339 Species:Arabidopsis thaliana


Alignment Length:270 Identity:108/270 - (40%)
Similarity:153/270 - (56%) Gaps:14/270 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNR-QKIKSLDVVGKIRREIQNLKLFRHPHIIKL 91
            |.:...||.|.||..::..::.|...||||.::| .||..     .:.|||.|.:...||:|::.
plant     4 YEMVKDLGFGNFGLARLMRNKQTNELVAVKFIDRGYKIDE-----NVAREIINHRALNHPNIVRF 63

  Fly    92 YQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPEN 156
            .:|:.||:.:.::|||.:|||||:.|...|:..|.:||.||||:|.||.|.|...|.|||||.||
plant    64 KEVVLTPTHLGIVMEYAAGGELFERISSVGRFSEAEARYFFQQLICGVHYLHALQICHRDLKLEN 128

  Fly   157 LLLDHN--MHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            .|||.:  ..:||.|||.|...:.....:::.|:|.|.||||.....|.|..||:|||||.||.:
plant   129 TLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEYDGKSVDVWSCGVALYVM 193

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGI----FPIPEY--LNKQVVNLVCQMLQVDPLKRANIEEIKKHE 278
            |.|..||:|...|..|||....|    :.||.|  :::....|:.::...:||.|:.::|||.|.
plant   194 LVGAYPFEDPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKLLSRIFVANPLHRSTLKEIKSHA 258

  Fly   279 WFQKDLPAYL 288
            ||.|:||..|
plant   259 WFLKNLPREL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 102/260 (39%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
SNRK2.9NP_179885.1 PKc_like 3..259 CDD:389743 102/259 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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