DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Smokl5

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001417119.1 Gene:Smokl5 / 690235 RGDID:1582875 Length:502 Species:Rattus norvegicus


Alignment Length:500 Identity:152/500 - (30%)
Similarity:231/500 - (46%) Gaps:96/500 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |::..|:|.|.:..||:..|::|...||||||    ||.......:..|:..:....||:||.|:
  Rat    27 YMILNTIGHGGYATVKLALHRLTGTPVAVKIL----IKKEHWCHPVTSEVDIMMSIHHPNIISLF 87

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            |||.|...|::|||...|.:|:..|.:.|:|||.:||..|:|::|...|||...||||||||:|:
  Rat    88 QVIETKKKIYLIMELAEGKQLYHRIREAGQLQEDEARGIFRQLLSATGYCHARGIVHRDLKPDNI 152

  Fly   158 LLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCG 222
            ::|....:||.||||:..:..|:.||..||:..:||||::.||||.||:||:|:.||:||.:..|
  Rat   153 MIDTRGRIKIIDFGLATHVRPGQKLRYHCGTYAFAAPEMLLGKLYEGPKVDVWTLGVVLYCMTVG 217

  Fly   223 TLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAY 287
            .|||||.::|.|..::.||.:.:|..::.::.:::..:|:|:|..|..|.::..|.|.:..... 
  Rat   218 RLPFDDSNIPQLRSQVVSGKYAVPPGMSGELKDMLSLLLKVNPQHRPTIPDLLTHPWLKTGSEG- 281

  Fly   288 LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQ 352
             ||...|:...:....||.....:.|.|..:|.:||.. :.::|....|||:   :|.|....:.
  Rat   282 -FPQPSEEWIPLRPDPAVLRAMEQIGFKAQDVKDSLYQ-NKYNQTVACYHLL---ERQALQGCDN 341

  Fly   353 INEINNFFVAGSPPPPPPPPVPQSSMDHQA--PLATVTVG------GGTSASSGTATPVPPVAG- 408
                     :..|.|..|...|..|:|:.|  |......|      |.:|.|.|:.....|..| 
  Rat   342 ---------STRPGPMNPWMAPFPSLDNPATFPQELRRRGSEPRWLGSSSNSQGSTYDQKPSYGL 397

  Fly   409 ----------------GTP--------SSTIP-------------------------IRPHPERI 424
                            .||        |.::|                         :.|.|.|.
  Rat   398 VKRASWPGGRLCRPLLTTPAVDLTNRISRSVPCFSSVHSRGEKNIKSTEDKSSASAEVNPVPSRA 462

  Fly   425 APMRDRQLAMSVQTSGGG------AFPEKTARGGTPIKRAKWHLG 463
            .|.|.|..|.::   |.|      .||          .|.|.|||
  Rat   463 WPKRFRGWAKNI---GNGLMQLCCCFP----------SRKKPHLG 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 100/251 (40%)
UBA_AID_AMPKalpha 297..360 CDD:270521 13/62 (21%)
AMPKA_C 457..580 CDD:213378 4/6 (67%)
Smokl5NP_001417119.1 None

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