DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Gm6176

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_017167972.1 Gene:Gm6176 / 620736 MGIID:3644439 Length:301 Species:Mus musculus


Alignment Length:268 Identity:104/268 - (38%)
Similarity:158/268 - (58%) Gaps:5/268 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKL 91
            :|.:..|||.|.|..||...|..|...||||||...|    :....|.||.:.:|...||:||||
Mouse    26 NYKMLNTLGEGKFSVVKRAFHVPTSTSVAVKILQNTK----EYTSPICREARIMKSLSHPNIIKL 86

  Fly    92 YQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPEN 156
            :.|:......:::|||.|.|||.|.|:|.|.|:|.:.||.|.||:..|.|||.|.|||||:|..|
Mouse    87 FHVVQRRETTYLVMEYASEGELQDRIIKVGSLEESETRRLFAQIVHAVQYCHDHHIVHRDIKASN 151

  Fly   157 LLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLC 221
            :|:::..:.|:.||||:..::.|:.|...||:..|.|||::..:.|.||.|||||.||:|:.::.
Mouse   152 ILINYRGNAKLCDFGLAAEVIPGQKLAGFCGTLPYCAPELLQAEKYEGPPVDIWSLGVLLFLMVS 216

  Fly   222 GTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPA 286
            |.|||...:...|.::|.|..|.||.:::..::|::.::|.::|.:|..|.:|.:|... :...|
Mouse   217 GNLPFQGRYFVDLKQEIISANFSIPSHVSIDILNVIIELLMINPSRRPTIHQIMRHPMI-RGSEA 280

  Fly   287 YLFPSSIE 294
            .|.|:|.:
Mouse   281 CLPPTSTQ 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 100/252 (40%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Gm6176XP_017167972.1 STKc_AMPK-like 26..273 CDD:270905 99/250 (40%)
Blue background indicates that the domain is not in the aligned region.

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