DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Tssk3

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_536690.1 Gene:Tssk3 / 58864 MGIID:1929914 Length:268 Species:Mus musculus


Alignment Length:256 Identity:91/256 - (35%)
Similarity:154/256 - (60%) Gaps:5/256 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |.||.|:|.||:.|||....:..:.|||:||:::.......:...:.||:|.::...|.:||::|
Mouse    10 YQLGKTIGEGTYSKVKEAFSKKHQRKVAIKIIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVY 74

  Fly    93 QVI-STPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPEN 156
            ::: |....|:::||...||::||.::..|.|.|.:|:..|:|::..:.|||...:.|||||.||
Mouse    75 EMLESADGKIYLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCEN 139

  Fly   157 LLLDHNMHVKIADFGLSNMMLDG--EFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            .|| ...::|:.|||.:.::...  |..:|.|||..||||||:.|..:...:.|:||.||:||.:
Mouse   140 ALL-QGFNLKLTDFGFAKVLPKSRRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVM 203

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGI-FPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEW 279
            ||.:|||||..:|.:..:.:.|: ||....::.:..:|:.::|:.|.:.|.:|||:..|.|
Mouse   204 LCASLPFDDTDIPKMLWQQQKGVSFPTHLGISTECQDLLKRLLEPDMILRPSIEEVSWHPW 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 91/256 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Tssk3NP_536690.1 STKc_TSSK3-like 9..265 CDD:271065 91/256 (36%)
Blue background indicates that the domain is not in the aligned region.

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