DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and brsk1a

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_693123.4 Gene:brsk1a / 564701 ZFINID:ZDB-GENE-121214-354 Length:746 Species:Danio rerio


Alignment Length:515 Identity:184/515 - (35%)
Similarity:269/515 - (52%) Gaps:84/515 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHII 89
            :|.|.|..|||.|..|.||:|.|.||..|||:||:||:|: |..|:.|:.|||..|||..|||::
Zfish    14 VGPYRLEKTLGKGQTGLVKLGIHCITSQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVL 77

  Fly    90 KLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            ||:.|......:::::|:|||||||||:||.|:|...:||:||:||||.:|:||.|.|.||||||
Zfish    78 KLHDVYENNKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 142

  Fly   155 ENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            ||||||...:::|||||::::.:....|.||||||:||.||||.|:.|.|...|:|||||||:||
Zfish   143 ENLLLDERNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDGRRADVWSCGVILFAL 207

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQ--K 282
            |.|.||||.:::..|..|:|||:|.:|.::......|:..|::|:|.||..:|.|:||.|:|  :
Zfish   208 LVGALPFDHDNLRQLLEKVKSGVFHMPHFIPPDCQALLRGMIEVNPEKRLTLEAIQKHAWYQAGR 272

  Fly   283 DLPAYLFP-----------SSIEQDSNVIDT-YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIA 335
            :.|....|           |..|.|.:|:|: |::.  |.:..||..:.    |..:..:|..:.
Zfish   273 NEPCPEQPPPRRVSMGRIMSLTELDPDVLDSMYSLG--CFRDRVKLAQD----LQCEEDNQEKMI 331

  Fly   336 YHLIIDNKR----FADD---AANQIN------------------------EINNFFVAGSPPPPP 369
            |:|::|.|.    :.|:   ..|.::                        |:.:....|||.|  
Zfish   332 YYLLLDRKERYPSYEDEDLPPRNDVDPPRKRVDSPMLTRHGRCRPERKSLEVLSVTEQGSPTP-- 394

  Fly   370 PPPVPQSSMD---HQAPLATVTVGGGTSASSG---------TATPVPPVAGGTPSSTIPIRPHPE 422
                |:.::|   |.....:|: |..|..||.         ..:|:|     ||..|....|||.
Zfish   395 ----PRRALDTSTHSQRSRSVS-GASTGLSSSPLSSPRVTPQGSPLP-----TPLGTPVHHPHPP 449

  Fly   423 RIAPMRDRQLAMSVQTSGGGAF--------PEKTARGGTPIKRAKWHLGIRSQSKPNDIM 474
            ...|......:.|.:..|||..        |.....||.....:..|...|..|..|:::
Zfish   450 TATPPSSSSSSSSSRAEGGGVGVGSLSLTPPSSPGGGGGMAASSSAHWRTRLNSLKNNLL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 130/254 (51%)
UBA_AID_AMPKalpha 297..360 CDD:270521 15/94 (16%)
AMPKA_C 457..580 CDD:213378 4/18 (22%)
brsk1aXP_693123.4 STKc_BRSK1_2 15..268 CDD:270983 130/253 (51%)
S_TKc 17..267 CDD:214567 129/250 (52%)
UBA_BRSK 295..348 CDD:270525 14/58 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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