DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and nuak1b

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_689990.3 Gene:nuak1b / 561496 ZFINID:ZDB-GENE-131120-18 Length:613 Species:Danio rerio


Alignment Length:571 Identity:169/571 - (29%)
Similarity:260/571 - (45%) Gaps:122/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |.|..|||.||:|||:....:.:..:||:|.:.::|||....:..|||||:.:...||||||.:|
Zfish    48 YELLETLGRGTYGKVRKAIERHSGREVAIKSIRKEKIKDEQDMVHIRREIEIMSSLRHPHIISIY 112

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            :|......|.::|||.|.|||:|||.:..:|.|.:.|.||:||:|.|.|||::.:||||||.||:
Zfish   113 EVFENKDKIVIVMEYASKGELYDYISERRRLTERETRHFFRQIVSAVHYCHKNGVVHRDLKLENV 177

  Fly   158 LLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCG 222
            |||.|.::|||||||||:....:.|:|.||||.||:||:::|:.|.|||||.|:.||:||.|:.|
Zfish   178 LLDENCNIKIADFGLSNLYHKDKLLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLVYG 242

  Fly   223 TLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWF------- 280
            ::|||......|.|:|.:|.:..|.. :.....|:..||.|:|.:||.:|:|..|.|.       
Zfish   243 SMPFDGGDHKNLIRQISNGEYREPSQ-SSDARGLIRWMLMVNPERRATVEDIANHWWVNWGWKNS 306

  Fly   281 ------QKDLPAYLFPSSIEQDSNV---------IDTYAVAEVCTKFGVKETEVHNSLLSGDPHD 330
                  |:|..:.:....|:..:..         .:.:.:.....|...||.:|..|..:|:  |
Zfish   307 VCDCESQRDNGSPMLARLIDWQNRTEPRPTKAIRSEPFLLVRQRPKKSKKENDVGVSHCNGE--D 369

  Fly   331 QLAIAYHL-IIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGGGTS 394
            .|.:.... |:..:...:..:..:.||.:  .||:|.....|.......:.              
Zfish   370 SLGLKRPKGILKTRTSEEQRSPSLEEIES--GAGTPEKESGPDGEDGDEEQ-------------- 418

  Fly   395 ASSGTATPVPPVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKT----------- 448
                         |.:||.::.|.|....:...:.|:       ||..:.||::           
Zfish   419 -------------GNSPSKSVSILPKKGILKNNQQRE-------SGYYSSPERSESSDLLSGNIT 463

  Fly   449 -ARGGTPIKRAKWHLGI------------------------------RSQSKPNDIMLEVYRAMK 482
             ....:|.|||....||                              ||||:|:.|:.|....:.
Zfish   464 PLAASSPPKRAVGRKGILKRNGKYSTYSGAPPLGVLGEPAPSDSGLSRSQSRPSSIVREDSDTIT 528

  Fly   483 ALSY---EWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSL 530
            ..|:   ||.   |...   |.|:::...::..||         |.:||.|
Zfish   529 NSSFCSTEWP---PPRT---RPNIRSCLSAENLLQ---------LANFKGL 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 115/251 (46%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/72 (15%)
AMPKA_C 457..580 CDD:213378 23/107 (21%)
nuak1bXP_689990.3 None

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