DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and brsk1b

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_009297839.1 Gene:brsk1b / 558390 ZFINID:ZDB-GENE-131122-54 Length:862 Species:Danio rerio


Alignment Length:500 Identity:176/500 - (35%)
Similarity:261/500 - (52%) Gaps:90/500 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHII 89
            :|.|.|..|||.|..|.||:|.|.||..|||:||:||:|: |..|:.|:.|||..|||..|||::
Zfish    15 VGPYRLEKTLGKGQTGLVKLGVHCITTQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVL 78

  Fly    90 KLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKP 154
            |||.|......:::::|:|||||||||:||.|:|...:||:||:||||.:|:||.|.|.||||||
Zfish    79 KLYDVYENNKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 143

  Fly   155 ENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYAL 219
            ||||||...:::|||||::::.:....|.||||||:||.||||.|:.|.|...|:|||||||:||
Zfish   144 ENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIRGEKYDGRRADVWSCGVILFAL 208

  Fly   220 LCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQ--K 282
            |.|.||||.:::..|..|:|||:|.:|.::......|:..|::|:..||..:|||:||.|:|  :
Zfish   209 LVGALPFDHDNLRQLLEKVKSGVFHMPHFIPPDCQALLRGMIEVNAEKRLTLEEIQKHPWYQGGR 273

  Fly   283 DLPAYLFP-----------SSIEQDSNVIDT-YAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIA 335
            :.|....|           |..:.|.:|::: :::.  |.:..||.|..    |..:..:|..:.
Zfish   274 NEPCPEQPPPRRVCVKRILSLTDLDPDVLESMHSLG--CFRDRVKLTRD----LQCEEENQEKLI 332

  Fly   336 YHLIIDNKR----FADD---AANQIN------------------------EINNFFVAGSPPPPP 369
            |:|::|.|.    :.|:   ..|.::                        |:.:....|||.|  
Zfish   333 YYLLLDRKERYPSYEDEHLPPRNDVDPPRKRVDSPMLTRHGRCRPERKSLEVLSVTEQGSPTP-- 395

  Fly   370 PPPVPQSSMDHQA----------------------PLATVTVGGGTSASSGTAT-PVPPVAGGTP 411
                |:.::|..|                      |.:.|.....|..:|.:|| ...|.||   
Zfish   396 ----PRRALDTSAHSQRSRSVSGASTGLSSSPLSSPRSPVFTFSQTEVTSASATQSKDPKAG--- 453

  Fly   412 SSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIK 456
            |||.|      |.:.....|...::.|......|...:....|::
Zfish   454 SSTTP------RASQRAPEQKTQTLPTKAASDRPHLQSMKSLPLQ 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 131/254 (52%)
UBA_AID_AMPKalpha 297..360 CDD:270521 14/94 (15%)
AMPKA_C 457..580 CDD:213378 176/499 (35%)
brsk1bXP_009297839.1 STKc_BRSK1_2 16..269 CDD:270983 131/253 (52%)
UBA_BRSK 296..349 CDD:270525 12/58 (21%)

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