DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and PRKAA1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_996790.3 Gene:PRKAA1 / 5562 HGNCID:9376 Length:574 Species:Homo sapiens


Alignment Length:611 Identity:339/611 - (55%)
Similarity:408/611 - (66%) Gaps:109/611 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPH 87
            ||||||:||.|||.|||||||:|:|::|..||||||||||||:||||||||||||||||||||||
Human    22 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 86

  Fly    88 IIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGK---------------LQEHQARRFFQQIIS 137
            ||||||||||||||||:|||||||||||||.|:|:               |.|.::||.||||:|
Human    87 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRKSDVPGVVKTGSTKELDEKESRRLFQQILS 151

  Fly   138 GVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLY 202
            |||||||||:|||||||||:|||.:|:.|||||||||||.||||||||||||||||||||||:||
Human   152 GVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 216

  Fly   203 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLK 267
            |||||||||.||||||||||||||||:||||||:||..|||..|:|||..|::|:..||||||:|
Human   217 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMK 281

  Fly   268 RANIEEIKKHEWFQKDLPAYLFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQL 332
            ||.|::|::||||::|||.||||......|.:||..|:.|||.||...|.||.:.|.:.:..|.|
Human   282 RATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPL 346

  Fly   333 AIAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSM-DHQAPLATVTVGGGTSAS 396
            |:||||||||:|.       :||..:|::|.||        |.|.: ||..              
Human   347 AVAYHLIIDNRRI-------MNEAKDFYLATSP--------PDSFLDDHHL-------------- 382

  Fly   397 SGTATPVPPVAGGTPSSTIPIRPHPERIAPM-----RDRQLAMSVQTSGGGAFPEKTARGGTPIK 456
                                .||||||:..:     |.|.....:.       |:|:...|  ::
Human   383 --------------------TRPHPERVPFLVAETPRARHTLDELN-------PQKSKHQG--VR 418

  Fly   457 RAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAK 521
            :|||||||||||:|||||.||.||:|.|.||||::|||::||||:|..|..:|||||||||||::
Human   419 KAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTYSKMSLQLYQVDSR 483

  Fly   522 SYLLDFKSLTNDEVE--------------------QGDDVIME--------SLTPPPLSV-SGVM 557
            :|||||:|:.::..|                    |..|...|        |||....|: |..:
Human   484 TYLLDFRSIDDEITEAKSGTATPQRSGSVSNYRSCQRSDSDAEAQGKSSEVSLTSSVTSLDSSPV 548

  Fly   558 PLQP-TGHHTMEFFEMCAALIIQLAR 582
            .|.| .|.||:|||||||.||..||:
Human   549 DLTPRPGSHTIEFFEMCANLIKILAQ 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 205/269 (76%)
UBA_AID_AMPKalpha 297..360 CDD:270521 27/62 (44%)
AMPKA_C 457..580 CDD:213378 75/152 (49%)
PRKAA1NP_996790.3 STKc_AMPK_alpha 24..294 CDD:270981 205/269 (76%)
UBA_AID_AAPK1 311..375 CDD:270586 32/78 (41%)
AMPKA1_C 419..572 CDD:213384 75/152 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 436 1.000 Domainoid score I573
eggNOG 1 0.900 - - E33208_3BB6Z
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 670 1.000 Inparanoid score I744
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275232at33208
OrthoFinder 1 1.000 - - FOG0000976
OrthoInspector 1 1.000 - - otm41791
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1362
SonicParanoid 1 1.000 - - X997
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.960

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