DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and sik1

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001119855.1 Gene:sik1 / 553465 ZFINID:ZDB-GENE-030131-9446 Length:811 Species:Danio rerio


Alignment Length:598 Identity:191/598 - (31%)
Similarity:287/598 - (47%) Gaps:118/598 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITR-----------VKVAVKILNRQKIKSLDVV 70
            |..:|| ::|.|.:..|||.|.|..||:..|::|:           ::||:||:::.::.|.: :
Zfish    16 AQARPL-QVGFYEIIRTLGKGNFAVVKLARHKVTKTQAITTFYFIFMQVAIKIIDKTRLNSAN-L 78

  Fly    71 GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQI 135
            .||.||:|.:||..||||||||||:.|...::::.||...||:|||:..:|::.|::||:.|.||
Zfish    79 EKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEYAKNGEMFDYLTSNGRMSENEARKKFWQI 143

  Fly   136 ISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGK 200
            ::.|||||||.|||||||.||||||.||::|:||||..|....||.|.|.||||.||||||..||
Zfish   144 LTAVDYCHRHHIVHRDLKTENLLLDANMNIKLADFGFGNFYNAGEPLSTWCGSPPYAAPEVFEGK 208

  Fly   201 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDP 265
            .|.||::||||.||:||.|:||:||||.:.:|.|.:::..|.|.||.::::...||:.:||.|||
Zfish   209 EYEGPQLDIWSLGVVLYVLVCGSLPFDGDSLPALRQRVTEGRFRIPFFMSQDCENLIRKMLVVDP 273

  Fly   266 LKRANIEEIKKHEWFQKDLPA---YLFPSSIEQDSNVID-TYAVAEVCTKFGVKETEVHNSLLSG 326
            .||..|.:||:|.|...|..|   .|..|..:.:||:.| :..|..:....|:.......| |..
Zfish   274 AKRITIAQIKQHRWMLADPSAPHQTLSLSLTDYNSNLGDYSEPVLGIMQTLGIDRQRTVES-LQN 337

  Fly   327 DPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVGG 391
            ..::..:..|:|:::  |..:..:.||:.                   |....:|.        .
Zfish   338 SSYNHFSAIYYLLLE--RVKEHRSQQISR-------------------QCGAWNQR--------S 373

  Fly   392 GTSASSGTATPVPPVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIK 456
            .|::.|.|...:...:....:|..|:.....  ||:..     .::...||.|..........:.
Zfish   374 RTASDSSTPEVIMESSDSFRNSAFPVATKVN--APIHS-----EMECEQGGLFQRVVCPVEASLN 431

  Fly   457 RAKWHLGIRSQS----------KPNDI-----MLEVYRAMKALSYEWKIINPYHV------RVRR 500
            ...|:..|...|          :|:|:     :|:|              .|.|:      |...
Zfish   432 GLLWNRSISPNSLLETTISEEVRPHDLEEEEGILQV--------------QPPHLPSTTSRRHTL 482

  Fly   501 QNVKTGKFSKMS---LQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLS---------- 552
            ..|.|.:|.:.|   :.:...|..|.....||.:|              |.||||          
Zfish   483 AEVSTSRFHQCSPPCIVVSPSDGASSDSCLKSSSN--------------TNPPLSPVVGDFSSLL 533

  Fly   553 VSGVMP--LQPTG 563
            :||..|  |.|.|
Zfish   534 ISGTGPGALGPAG 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 129/265 (49%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/63 (19%)
AMPKA_C 457..580 CDD:213378 30/143 (21%)
sik1NP_001119855.1 STKc_SIK 25..288 CDD:270973 128/263 (49%)
UBA_SIK1 309..358 CDD:270591 9/51 (18%)

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