DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and SNRK

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_060189.3 Gene:SNRK / 54861 HGNCID:30598 Length:765 Species:Homo sapiens


Alignment Length:578 Identity:170/578 - (29%)
Similarity:270/578 - (46%) Gaps:108/578 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQ 78
            ||...|......|.|.|..|||.|.|..||:..|..|..|||||::::.|:.:| ..|.:.:|::
Human     2 AGFKRGYDGKIAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-ATGHLFQEVR 65

  Fly    79 NLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGK-LQEHQARRFFQQIISGVDYC 142
            .:||.:||:|::||:||.|.:.:::|:|...||::||||:||.: |.|..|:::|.||:..:.||
Human    66 CMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYC 130

  Fly   143 HRHMIVHRDLKPENLL-LDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPE 206
            |:..:|||||||||:: .:....||:.|||.||....|:.|.|||||..|:|||::.|..|..|.
Human   131 HKLHVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYDAPA 195

  Fly   207 VDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANI 271
            |||||.||||:.|:||..||.:.:.......|....:.:|.:::|:..:|:.:|||.||.:||::
Human   196 VDIWSLGVILFMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECKDLITRMLQRDPKRRASL 260

  Fly   272 EEIKKHEWFQKDLPA----YLFP------SSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSG 326
            |||:.|.|.|...|:    |..|      .|.|:.:::|....:.::..:..:.|.      |..
Human   261 EEIENHPWLQGVDPSPATKYNIPLVSYKNLSEEEHNSIIQRMVLGDIADRDAIVEA------LET 319

  Fly   327 DPHDQLAIAYHLIID-------NKRFADDAANQINEINNFFVAGSPPPPPPPPVPQSSMDH--QA 382
            :.::.:...|.|:.:       .|.....:|:..|....|..:.    |....|||...|.  ..
Human   320 NRYNHITATYFLLAERILREKQEKEIQTRSASPSNIKAQFRQSW----PTKIDVPQDLEDDLTAT 380

  Fly   383 PLATVTV------------GGGTS---ASSGTATPVPPVAGGTPS-STIPIRPHPERIAPMRDRQ 431
            ||:..||            .|..|   ..|.....:|.:||  |: ||:|    |..:.|     
Human   381 PLSHATVPQSPARAADSVLNGHRSKGLCDSAKKDDLPELAG--PALSTVP----PASLKP----- 434

  Fly   432 LAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHV 496
                            ||.|...:.|.:       :.:..|     ....|.:|...:::     
Human   435 ----------------TASGRKCLFRVE-------EDEEED-----EEDKKPMSLSTQVV----- 466

  Fly   497 RVRRQNVKTGKFS--KMSLQLYQVDAKSYLLDFKSLTNDEVEQGDDVIMESLTPPPLS 552
             :||:...|.:.:  |.:..|.|:             .:|.|..|:..|:...||.||
Human   467 -LRRKPSVTNRLTSRKSAPVLNQI-------------FEEGESDDEFDMDENLPPKLS 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 109/256 (43%)
UBA_AID_AMPKalpha 297..360 CDD:270521 8/69 (12%)
AMPKA_C 457..580 CDD:213378 18/98 (18%)
SNRKNP_060189.3 STKc_SNRK 12..269 CDD:270976 109/257 (42%)
UBA_SNRK 288..335 CDD:270524 7/52 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 512..634
Blue background indicates that the domain is not in the aligned region.

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