DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Smok3a

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001119517.1 Gene:Smok3a / 545814 MGIID:3693943 Length:504 Species:Mus musculus


Alignment Length:472 Identity:134/472 - (28%)
Similarity:225/472 - (47%) Gaps:55/472 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLY 92
            |::..|:|.|....||:.:|::|...||||.:.:::.....|:.    |::.|.:..||:||.|.
Mouse    28 YVMLETIGHGGCATVKLAQHRLTGTHVAVKTIRKREYWCNRVIS----EVELLMMADHPNIISLL 88

  Fly    93 QVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENL 157
            |||.|...:::|||...|..|:.:|.|.|.||||:||..|:|::|.::|||...||||||||:|:
Mouse    89 QVIETKKKVYLIMELCKGKSLYQHIRKAGYLQEHEARALFKQLLSAMNYCHNQGIVHRDLKPDNI 153

  Fly   158 LLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCG 222
            :::.:..|||.||||...:..|:.|...||:..::||||:....|.||::|:|:.||:||.::.|
Mouse   154 MVEKDGKVKIIDFGLGTKVKPGQKLNLFCGTYPFSAPEVLLSTPYDGPKIDVWTLGVVLYFMVTG 218

  Fly   223 TLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAY 287
            .:|||...:..|.::|.:|.:.||..|:.::.:|:..::..:|..|..:.|:..|.|..:.  :.
Mouse   219 KIPFDACSIKKLVKRILAGKYSIPSRLSAELQDLLSLLMTANPKLRPTVAEVMVHPWVTEG--SG 281

  Fly   288 LFPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQ 352
            :||...|:.:.:....|:.:.....|.:..::.:||.. ...:|...:|.|:........|...:
Mouse   282 VFPDPCEEQTPLKPDPAIVKAMGHIGFQAQDIEDSLRQ-RKFNQTMASYCLLKKQILKECDRPTR 345

  Fly   353 INEINNFFVAGSPPPPP-----------------PPPVPQSSMDHQAPLATVTVGGGTSASSGTA 400
            ...:|     .|..|.|                 .|..|.||.:.|..:.    |..||......
Mouse   346 ARPVN-----PSVTPFPSLVDTATTRLGLRRRENEPTCPWSSANRQVSVC----GKSTSKKRDRR 401

  Fly   401 TPVPPVAGGTPSSTIPIRPHPERIAPMRDR------QLAMSVQTSGGGAFPEKTARGGT------ 453
            ...|.|. |.|..|.|...|..    .|.|      .:..:||.:..    |::.:|.|      
Mouse   402 VSWPSVL-GRPRHTAPTMDHTR----TRTRSVPCICSMFCTVQPNSS----EESTQGHTRASAAD 457

  Fly   454 -PIKRAKWHLGIRSQSK 469
             |:....|..||:..::
Mouse   458 KPVHSRGWPRGIKGWTR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 92/251 (37%)
UBA_AID_AMPKalpha 297..360 CDD:270521 9/62 (15%)
AMPKA_C 457..580 CDD:213378 3/13 (23%)
Smok3aNP_001119517.1 STKc_AMPK-like 27..275 CDD:270905 92/250 (37%)
UBA_MARK_Par1 295..334 CDD:270522 7/39 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..421 9/36 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..468 5/30 (17%)

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