DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Gm14151

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001091446.1 Gene:Gm14151 / 433486 MGIID:3651016 Length:640 Species:Mus musculus


Alignment Length:127 Identity:28/127 - (22%)
Similarity:42/127 - (33%) Gaps:24/127 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTPLQPLEDSRIIFDESLTKNEN-----------EQKSFVEQDSSYESSGNR-------FGSQKG 49
            |.|.:.|:....:.||..::.||           |.:.|.......|:.|:|       |.|...
Mouse   419 TDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTK 483

  Fly    50 KKIAKVIRDACCSHCSTTTTTLWRKNDEGNLECNACNLYYRHNKVKRPLSLCKQKPTTRKRR 111
            ..|.||...|...........|:      :|..||..:....||:..|:......|.:.|.|
Mouse   484 PIINKVASVAENKGLFEEAAKLY------DLAKNADKVLELMNKLLSPVVPQISAPQSNKER 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 22/105 (21%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Gm14151NP_001091446.1 STKc_AMPK-like 23..270 CDD:270905
UBA_MARK_Par1 290..328 CDD:270522
Blue background indicates that the domain is not in the aligned region.

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