DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and KP78b

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001163587.1 Gene:KP78b / 41361 FlyBaseID:FBgn0026063 Length:604 Species:Drosophila melanogaster


Alignment Length:518 Identity:165/518 - (31%)
Similarity:261/518 - (50%) Gaps:61/518 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAAAEAVAA--GSANGQPLVKIGHYLLG---------ATLGTGTFGKVKIGEHQITRVKVAVKIL 59
            :|||:.|..  ||:.|:...|...|:.|         .|||.|.|.|||:..|..|..:||:|::
  Fly    30 SAAAQNVGGCFGSSGGRSSPKFQSYVNGNGYGVYKIIKTLGKGNFAKVKLAIHLPTGREVAIKLI 94

  Fly    60 NRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQ 124
            ::..:.:: ...|:.||:..:|...||:|::|.|||.:...::::||||||||||:|:||:|:::
  Fly    95 DKTALNTI-ARQKLYREVNIMKKLNHPNIVRLLQVIESERTLYLVMEYVSGGELFNYLVKNGRMR 158

  Fly   125 EHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSP 189
            |..||..|:|::|.::|||...|||||||.||||||..|.:||||||.|........|.|.||||
  Fly   159 ERDARVLFRQLVSAIEYCHSKSIVHRDLKAENLLLDQQMKLKIADFGFSTTFEPKAPLETFCGSP 223

  Fly   190 NYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVV 254
            .|||||:..||.|:|||||.||.||:||.|:.|:||||..::..|..::..|.:.:|.|::.:..
  Fly   224 PYAAPELFRGKKYSGPEVDSWSLGVVLYTLVSGSLPFDGTNLKELRDRVLRGKYRVPYYVSIECE 288

  Fly   255 NLVCQMLQVDPLKRANIEEIKKHEWFQKDLPAYLFPSSIEQDSNV-------IDTYAV--AEVCT 310
            :|:.:.|.::|.:|.::..:....|..         ...||.:.:       :|.:.|  ..:.:
  Fly   289 SLIRKFLVLNPTQRTSLSAVMADRWIN---------MGYEQGNGLRPFQEKPMDLHDVNRLSLLS 344

  Fly   311 KFGVKETEVHNSLLSGDPHDQLAIAYHLIIDNKRFADDAANQINEINNFFVAGSPPPPPPPPVPQ 375
            ..|.|..:|..| |.....|.:...| :::|..:....|.::        .:||.....|..:|.
  Fly   345 NMGHKPRDVEQS-LKNQKFDDIYCTY-MLLDVAKPRSTACSE--------KSGSSFRETPTAMPG 399

  Fly   376 SSMDHQAPLA--TVTVGGGTSASSGTATPVPPVAGGTPSSTIPIRPH------PERIAPMRDRQL 432
            ||. ...|:|  .||:...|.|.. .:||..|.|    :|..|:.|.      |..:.|...:.:
  Fly   400 SSR-IPVPIAAPNVTISQVTFALD-KSTPNRPAA----TSIRPMAPRLANALTPLPLTPPPKKYI 458

  Fly   433 AMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYH 495
            ..|...:   |.|.::.....| :.|....|:.|   |.|:...:..|.:.|:...|:.:..|
  Fly   459 CCSASKA---ANPRRSEPSSIP-QSAMPKKGVGS---PVDVKTTLLSAQRKLAVNQKLTSASH 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 109/263 (41%)
UBA_AID_AMPKalpha 297..360 CDD:270521 11/71 (15%)
AMPKA_C 457..580 CDD:213378 9/39 (23%)
KP78bNP_001163587.1 PKc_like 63..314 CDD:304357 107/251 (43%)
S_TKc 63..314 CDD:214567 107/251 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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