DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Nuak1

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001369005.1 Gene:Nuak1 / 41256 FlyBaseID:FBgn0262617 Length:2803 Species:Drosophila melanogaster


Alignment Length:702 Identity:193/702 - (27%)
Similarity:289/702 - (41%) Gaps:191/702 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQMRAAAAEAV------AAGSA----NGQPLVKIGHYLLGAT----------------------- 33
            |...|..|||.      |.|::    :|.|..:|.:.:.|..                       
  Fly    11 PNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIANTGNVKMNNHRKKLRQRFDIIKK 75

  Fly    34 LGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP 98
            ||.||:|||::|.::.|..:||:|.:.:.||::...:.:||||:|.:....||:||.:|:|....
  Fly    76 LGQGTYGKVQLGINKETGQEVAIKTIKKCKIEAEADLVRIRREVQIMSSVHHPNIIHIYEVFENR 140

  Fly    99 SDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNM 163
            ..:.::||:.:||||:||:.:...|.|.:|||.|:|:.:.|.|||:|.|.|||||.||:|||...
  Fly   141 EKMVLVMEFAAGGELYDYLSERKVLTEEEARRIFRQVATAVYYCHKHKICHRDLKLENILLDEKG 205

  Fly   164 HVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDD 228
            :.|||||||||:..|...|.|.||||.||:||::.|..|.|||||.||.||:||.|:.|::|||.
  Fly   206 NAKIADFGLSNVFDDQRLLGTFCGSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLVYGSMPFDG 270

  Fly   229 EHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK----------- 282
            .:...|.::|..|.:..|...:: ...|:..||.|.|.|||:||:|..|.|..:           
  Fly   271 SNFKRLVKQISQGDYYEPRKPSR-ASTLIRDMLTVCPRKRASIEQICSHWWVNENDNVSCLDLAE 334

  Fly   283 ----------DLPAYLFPSSIEQDSNVI---DTYAVAEVCTKFGVKETEVHNSLLS-GDPHDQLA 333
                      |:...|.|::|..|..|:   :..|.|:......|..:....|:.. |.|:.:  
  Fly   335 DLANQTPVRLDVLLSLTPATITADQLVVPSAEGAAAAKAAANERVPRSHSVGSIRDMGPPNTE-- 397

  Fly   334 IAYHLIIDNKRFADDAA-------------------------------------NQINEINNFFV 361
             |...|:|......:||                                     .:....|:.||
  Fly   398 -AERRILDMVAAGGEAALMPSPTRTITPAQSPVQTKRKLQPTVSTENAAGTTAKKKEKPANSSFV 461

  Fly   362 A---GSPPPPPPPPV--PQSSMDHQAPLATV---------------TVGGGTSASSGTAT---PV 403
            .   |:|....||.:  ||:::.....:|.:               .||.......||||   |.
  Fly   462 ISKDGAPLTEAPPTIIEPQATLMEAETIANIPEEVPVPSYSQKDMQAVGDICDLLMGTATTPAPA 526

  Fly   404 PPVAGGTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGGAFPEKTARGGTPIKRAKWHLGIRSQS 468
            ||..  ||.:..|.|...:.:....:.:.|..|                  ||:      ..::.
  Fly   527 PPAP--TPVARQPTRGKLDAVVETPEEKDATKV------------------IKK------FVNKH 565

  Fly   469 KPNDIMLEVYR-AMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTN 532
            |..|::..:.. |.||.:....:..|..||            |.|||           |..:|..
  Fly   566 KTADLVNAINESASKAAAPVSAVAPPPFVR------------KCSLQ-----------DESTLNK 607

  Fly   533 DEVEQGDDVIMES---LTPPP------------LSVSGVMPLQPTGHHTMEF 569
            ...|:....|:|:   ..|||            ||:.||    ..|....||
  Fly   608 FNAERRKSRILETAEKFQPPPPVAAAPPEKPKKLSIPGV----SVGSFKKEF 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 112/277 (40%)
UBA_AID_AMPKalpha 297..360 CDD:270521 13/103 (13%)
AMPKA_C 457..580 CDD:213378 27/129 (21%)
Nuak1NP_001369005.1 STKc_NUAK 68..321 CDD:270975 110/253 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461608
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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