DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and CG1227

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_649712.1 Gene:CG1227 / 40872 FlyBaseID:FBgn0037491 Length:320 Species:Drosophila melanogaster


Alignment Length:289 Identity:81/289 - (28%)
Similarity:131/289 - (45%) Gaps:37/289 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKL- 91
            |.:...|.||.|..:.:||:..||...|:|   |....|:|......|||:|.:.....::|:: 
  Fly    30 YTIRERLATGGFSLIDLGENASTRRSYAIK---RITCHSIDDQNIALREIENCRKIDSENVIRVV 91

  Fly    92 -YQ-------VISTPSDIFMIMEYVSGGELFDYIVKHGKLQEH----QARRFFQQIISGVDYCHR 144
             |:       ||:|.|.:|:::.|...|.|.|::....:.|:|    |..:.|..:..|:...|.
  Fly    92 DYELKGQADIVINTTSTLFIVLPYYKHGSLADHLQLRSRKQDHMPEAQILQIFLGVCEGLKAIHE 156

  Fly   145 HM---IVHRDLKPENLLLDHNMHVKIADFG-LSNMML------DGEFLRTSC---GSPNYAAPEV 196
            .|   :.|||||..|:.|..:....|.|.| ::...|      |.:.|:...   .|..|.|||:
  Fly   157 AMPVPLAHRDLKTANICLSDSFEPIIVDLGSMTEARLQIVGQTDAQRLQDEAEERSSIVYRAPEL 221

  Fly   197 ISGKLYA--GPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFRKIKSGIFPIPE--YLNKQVVN 255
            .:.|.|.  ....||||.|.:|||:.....|:|.  |...::...:.||...|||  ...:.:..
  Fly   222 FTVKTYCTIDERTDIWSLGCVLYAMCYFNSPYDPIYERGDSVALAVLSGNINIPEDSIYTEDMHE 286

  Fly   256 LVCQMLQVDPLKRANIEEI--KKHEWFQK 282
            |:..||:.||::|..:..:  :.|:..||
  Fly   287 LIKYMLRTDPMERPFVFSVIERTHDLIQK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 79/285 (28%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
CG1227NP_649712.1 STKc_16 29..314 CDD:270888 79/286 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.