DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and C27D6.11

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001364716.1 Gene:C27D6.11 / 3564833 WormBaseID:WBGene00044388 Length:331 Species:Caenorhabditis elegans


Alignment Length:268 Identity:98/268 - (36%)
Similarity:151/268 - (56%) Gaps:19/268 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LGTGTFGKVKIGEHQITRVKVAVKILN----RQKIKSLDVVGK-IRREIQNLKLFRHPHIIKLYQ 93
            ||:|::.:|........:::||.|::|    |:|.   |.:.| :.||.:.:||.:|.:|.:||:
 Worm    42 LGSGSYSRVARATWGDKKLEVAAKVINITSTREKD---DYIKKFLPREKEIVKLLKHDNICRLYE 103

  Fly    94 VISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRDLKPENLL 158
            :||.|..|..:.|:.:||:|...:.....:.|..|:..|:|.|:.:.:...:.|||||||.||:.
 Worm   104 MISFPDHIIFVTEFCAGGDLLRKMKDIKTMNEDDAKFTFRQFIAALMHLQSYNIVHRDLKCENIF 168

  Fly   159 LDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGT 223
            ||.:.:||:.|||.|.::..||...|.|||..|.|||::.|:.|:|..||:||.|||||.:|.|:
 Worm   169 LDKHENVKLGDFGFSRILKPGEKSGTFCGSRAYVAPEILRGREYSGNAVDVWSTGVILYIMLVGS 233

  Fly   224 LPFDDEHVPT------LFRKIKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQK 282
            :||||.: ||      |..|||   ||.....:.|...|:.::||.....|...:.|.:.||. |
 Worm   234 MPFDDRN-PTKMIERQLAHKIK---FPKLCTASVQSKALILEILQPHAPNRPTYKAICESEWL-K 293

  Fly   283 DLPAYLFP 290
            ..|.|:.|
 Worm   294 SQPYYMKP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 93/256 (36%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
C27D6.11NP_001364716.1 Protein Kinases, catalytic domain 38..292 CDD:473864 93/256 (36%)
Blue background indicates that the domain is not in the aligned region.

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