DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Sik2

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster


Alignment Length:652 Identity:196/652 - (30%)
Similarity:295/652 - (45%) Gaps:158/652 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AEAVAAGSANGQPLVK------IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSL 67
            :.||.||..:|:.|:|      :|.|.:..|:|.|.|..||:..|:||:.:||:||:::.::...
  Fly   116 SSAVGAGGISGKDLLKLKEPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQT 180

  Fly    68 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFF 132
            : :.|:.||::.:|..:||||||||||:.|.:.|:::.||.|.||:||||.|:|::.|..||..|
  Fly   181 N-LQKVYREVEIMKRLKHPHIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKF 244

  Fly   133 QQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVI 197
            .||||.|:|||:..|||||||.||||||.||::||||||.||....||.|.|.||||.||||||.
  Fly   245 WQIISAVEYCHKKGIVHRDLKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVF 309

  Fly   198 SGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQ 262
            .||.|.|||:||||.||:||.|:||.||||...:.:|..::.||.|.||.:::.:..:|:.:||.
  Fly   310 EGKQYTGPEIDIWSLGVVLYVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLV 374

  Fly   263 VDPLKRANIEEIKKHEWFQKDLPAYL----FPSSIEQDSNVIDTYAVAEVCTKF-GVKETEVHNS 322
            ::|.:|..|::||:|.|...:|..::    :....|:.::|..:..:..:..:: |:...:...|
  Fly   375 LEPTRRYTIDQIKRHRWMCPELLEHVLIAKYNLGAERQTSVEPSEDILRIMAEYVGIGSDKTRAS 439

  Fly   323 LLSGDPHDQLAIAYHLIIDNKRFADDAAN---------------------------------QIN 354
             |..:.:|.:|..|.|:.|......:.:|                                 |..
  Fly   440 -LKKNTYDHVAAIYLLLQDRVSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQQQSQQQSK 503

  Fly   355 EINNFFV------------------------AGSPPPPPPP-------------PVPQSSMDHQA 382
            .|:...:                        ||:.|..|.|             |:|.:...|  
  Fly   504 TISTSSILAKDQCHKRLSRHQTVLMSERNAHAGATPTVPDPGPGYYAKYGPLQLPLPLTGHSH-- 566

  Fly   383 PLATVTVGGGTSA-SSGTA-----TPVPPVAGGTPSSTIPIRPHPER-----IAPMRDRQLAMSV 436
             |.....|||... :||..     ||:|..|...||:.........|     .:|...|.:|:|:
  Fly   567 -LTGYLNGGGVEVDASGIPLPMRYTPLPTAASPAPSNCSSTSSRVGRHSLSSSSPRSHRPVAISL 630

  Fly   437 QTSGGGAFPEKTAR-----GGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHV 496
            ......:......|     ||.|:..    :|:...||                           
  Fly   631 SIDNNPSLANLRCREMMEAGGGPVGA----VGVPLASK--------------------------- 664

  Fly   497 RVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTND--EVEQGDDVIMESLTPPP---LSVSGV 556
                             ||:|..::..:   |..|.|  .:.|....:.|....||   .||.||
  Fly   665 -----------------QLHQTISEFII---KQSTEDCRALLQQSTAVAEGKDDPPKAESSVGGV 709

  Fly   557 MP 558
            .|
  Fly   710 PP 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 127/254 (50%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/96 (13%)
AMPKA_C 457..580 CDD:213378 18/107 (17%)
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 126/252 (50%)
UBA_SIK 418..458 CDD:270523 7/40 (18%)

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