DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPKalpha and Sik2

DIOPT Version :9

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_569972.1 Gene:Sik2 / 31170 FlyBaseID:FBgn0025625 Length:1398 Species:Drosophila melanogaster


Alignment Length:652 Identity:196/652 - (30%)
Similarity:295/652 - (45%) Gaps:158/652 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AEAVAAGSANGQPLVK------IGHYLLGATLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSL 67
            :.||.||..:|:.|:|      :|.|.:..|:|.|.|..||:..|:||:.:||:||:::.::...
  Fly   116 SSAVGAGGISGKDLLKLKEPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQT 180

  Fly    68 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFF 132
            : :.|:.||::.:|..:||||||||||:.|.:.|:::.||.|.||:||||.|:|::.|..||..|
  Fly   181 N-LQKVYREVEIMKRLKHPHIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYGRMSESAARFKF 244

  Fly   133 QQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVI 197
            .||||.|:|||:..|||||||.||||||.||::||||||.||....||.|.|.||||.||||||.
  Fly   245 WQIISAVEYCHKKGIVHRDLKAENLLLDLNMNIKIADFGFSNHFKPGELLATWCGSPPYAAPEVF 309

  Fly   198 SGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVNLVCQMLQ 262
            .||.|.|||:||||.||:||.|:||.||||...:.:|..::.||.|.||.:::.:..:|:.:||.
  Fly   310 EGKQYTGPEIDIWSLGVVLYVLVCGALPFDGSTLQSLRDRVLSGRFRIPFFMSSECEHLIRRMLV 374

  Fly   263 VDPLKRANIEEIKKHEWFQKDLPAYL----FPSSIEQDSNVIDTYAVAEVCTKF-GVKETEVHNS 322
            ::|.:|..|::||:|.|...:|..::    :....|:.::|..:..:..:..:: |:...:...|
  Fly   375 LEPTRRYTIDQIKRHRWMCPELLEHVLIAKYNLGAERQTSVEPSEDILRIMAEYVGIGSDKTRAS 439

  Fly   323 LLSGDPHDQLAIAYHLIIDNKRFADDAAN---------------------------------QIN 354
             |..:.:|.:|..|.|:.|......:.:|                                 |..
  Fly   440 -LKKNTYDHVAAIYLLLQDRVSHKKEQSNGLGASALASSTSASRMIYSSRNDHQPTQQQSQQQSK 503

  Fly   355 EINNFFV------------------------AGSPPPPPPP-------------PVPQSSMDHQA 382
            .|:...:                        ||:.|..|.|             |:|.:...|  
  Fly   504 TISTSSILAKDQCHKRLSRHQTVLMSERNAHAGATPTVPDPGPGYYAKYGPLQLPLPLTGHSH-- 566

  Fly   383 PLATVTVGGGTSA-SSGTA-----TPVPPVAGGTPSSTIPIRPHPER-----IAPMRDRQLAMSV 436
             |.....|||... :||..     ||:|..|...||:.........|     .:|...|.:|:|:
  Fly   567 -LTGYLNGGGVEVDASGIPLPMRYTPLPTAASPAPSNCSSTSSRVGRHSLSSSSPRSHRPVAISL 630

  Fly   437 QTSGGGAFPEKTAR-----GGTPIKRAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHV 496
            ......:......|     ||.|:..    :|:...||                           
  Fly   631 SIDNNPSLANLRCREMMEAGGGPVGA----VGVPLASK--------------------------- 664

  Fly   497 RVRRQNVKTGKFSKMSLQLYQVDAKSYLLDFKSLTND--EVEQGDDVIMESLTPPP---LSVSGV 556
                             ||:|..::..:   |..|.|  .:.|....:.|....||   .||.||
  Fly   665 -----------------QLHQTISEFII---KQSTEDCRALLQQSTAVAEGKDDPPKAESSVGGV 709

  Fly   557 MP 558
            .|
  Fly   710 PP 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 127/254 (50%)
UBA_AID_AMPKalpha 297..360 CDD:270521 12/96 (13%)
AMPKA_C 457..580 CDD:213378 18/107 (17%)
Sik2NP_569972.1 STKc_SIK 140..392 CDD:270973 126/252 (50%)
S_TKc 141..392 CDD:214567 126/251 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461614
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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