DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPKalpha and Hunk

DIOPT Version :10

Sequence 1:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_056570.1 Gene:Hunk / 26559 MGIID:1347352 Length:714 Species:Mus musculus


Alignment Length:628 Identity:175/628 - (27%)
Similarity:297/628 - (47%) Gaps:120/628 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KIGHYLLGA-TLGTGTFGKVKIGEHQITRVKVAVKILNRQKIKSLDVVGK-IRREIQNLKLFRHP 86
            ::|:||:|: .||.|:|.||:.|.|.:|..|||:|::::::.|....|.| :|||.|..::.|||
Mouse    57 RVGNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHP 121

  Fly    87 HIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQEHQARRFFQQIISGVDYCHRHMIVHRD 151
            :|.:|..::.|.:..:::||...||.|...|.:..:|.|.:|||:.:|:||.|::.||..:||||
Mouse   122 NITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLDEAEARRYIRQLISAVEHLHRAGVVHRD 186

  Fly   152 LKPENLLLDHNMHVKIADFGLSN---MMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCG 213
            ||.||||||.:.::|:.||||||   ::...:...|.||||.|||||:::.|.| ||::|:||.|
Mouse   187 LKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKY-GPKIDVWSIG 250

  Fly   214 VILYALLCGTLPFDDE--HVPTLFRK-IKSGIFPIPEYLNKQVVNLVCQMLQVDPLKRANIEEIK 275
            |.:||:|.|||||..|  .:..|::| :...:.|:|..|:...||.:..:|:.||:||.||::..
Mouse   251 VNMYAMLTGTLPFTVEPFSLRALYQKMVDKAMNPLPTQLSTGAVNFLRSLLEPDPVKRPNIQQAL 315

  Fly   276 KHEWFQKD----LPAYL-FPSSIEQDSNVIDTYAVAEVCTKFGVKETEVHNSLLSGDPHDQLAIA 335
            .:.|..::    :|..: :|:.|..:.  :....|..:..|.|.|.::|.|::||......||| 
Mouse   316 ANRWLNENYTGKVPCNVTYPNRISLED--LSPSVVLHMTEKLGYKNSDVINTVLSNRACHILAI- 377

  Fly   336 YHLI-------IDNKRFADDA---ANQINEINNFFVAGSPPPPPPPPVPQSSMDHQAPLATVTVG 390
            |.|:       :..|....|:   ..|:.:|........|              ::|.|.|.|..
Mouse   378 YFLLNKKLERYLSGKSDIQDSICYKTQLYQIEKCRATKEP--------------YEASLDTWTRD 428

  Fly   391 GGTSASSGTATPVPPVAG-------------GTPSSTIPIRPHPERIAPMRDRQLAMSVQTSGGG 442
            ....|............|             ..||..   :|.|..|..::..:..:..:.:...
Mouse   429 FEFHAVQDKKPKEQEKRGDFLHRPFSKKLDKNLPSHK---QPSPSLITQLQSTKALLKDRKASKS 490

  Fly   443 AFPEKTA-----------------------------RGGTPIKRAKWHL-GIRSQS---KPNDIM 474
            .||:|.:                             |....:|:.:.|. |..|.|   |...::
Mouse   491 GFPDKDSFVCRNLFRKTSDSNCVASSSMEFIPVPPPRTPRIVKKLEPHQPGPGSASILPKEEPLL 555

  Fly   475 LEVYRAMKALSYE--WKIINP-YHVRV--------RR--------QNVKTGKFSKMSLQLYQVDA 520
            |::.|:.:::..|  .::::| :|.|:        ||        |.:.:|..|.:...|:    
Mouse   556 LDMVRSFESVDREDHIELLSPSHHYRILSSPVSLARRNSSERTLSQGLLSGSTSPLQTPLH---- 616

  Fly   521 KSYLLDFKSLTNDEVEQGDDVIMESLTPPPLSVSGVMPLQPTG 563
             |.|:.|.....:...:.:.|    .:|||:..:|:  |||.|
Mouse   617 -STLVSFAHEEKNSPPKEEGV----CSPPPVPSNGL--LQPLG 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 108/262 (41%)
UBA_AID_AMPKalpha 297..360 CDD:270521 17/72 (24%)
AMPKA_C 457..580 CDD:213378 29/130 (22%)
HunkNP_056570.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
STKc_HUNK 58..320 CDD:270972 108/262 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 624..658 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..714
Blue background indicates that the domain is not in the aligned region.

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